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2017-07-27Merge branch 'master' of github.com:genetics-statistics/GEMMA.Peter Carbonetto
2017-07-27Linking to gemma 2.21 instead of gsl 2.2.1 in Makefile.linux.Peter Carbonetto
2017-07-27Updated version to 0.97.Peter Carbonetto
2017-07-26Fixed link in README.Peter Carbonetto
2017-07-26Merge pull request #60 from genenetwork/tests.Peter Carbonetto
2017-07-26test_suite: run shunit2 from system when availablePjotr Prins
2017-07-26test_suite: replace awk with perl to compute file contents and default to ↵Pjotr Prins
shunit2 in repo fixes https://github.com/genetics-statistics/GEMMA/issues/55
2017-07-26Added a line count test for KPjotr Prins
2017-07-26github: fix links to gemma repoPjotr Prins
2017-07-21Added note in README about LGPL license for shuint2.Peter Carbonetto
2017-07-21Removed some more commented-out code from mvlmm.cpp.Peter Carbonetto
2017-07-19Removed some commented out code from mvlmm.cpp.Peter Carbonetto
2017-07-18Moved shunit2 files to test directory.Peter Carbonetto
2017-07-18Fixed failing test. New test report summary:Peter Carbonetto
tests passed: 13 tests failed: 0 tests total: 13 success rate: 100%
2017-07-18Added shunint2 v2.0.3 files.Peter Carbonetto
2017-07-18Merge pull request #56 from genenetwork/compiler-warningsPeter Carbonetto
Compiler warnings are optional.
2017-07-18Merge pull request #54 from genenetwork/testsPeter Carbonetto
Added test suite, make check and openblas support. Need to fix one test that is still failing.
2017-07-16sunit2: added instructionsPjotr Prins
2017-07-12Update README.mdxiangzhou
2017-07-11Makefile: add extra slash to support relative eigen pathsPjotr Prins
2017-07-11Makefile: silence compiler warnings for Eigen libsPjotr Prins
2017-07-11Makefile: compiler warnings optionalPjotr Prins
2017-07-11Makefile: compile without -Weffc++ as suggested by ↵Pjotr Prins
https://stackoverflow.com/questions/11496942/understanding-weffc#11529328 reduces warnings
2017-07-09Makefile: fix output on make checkPjotr Prins
2017-07-09Makefile: force unit tests to throw a make error on less than 100% successPjotr Prins
2017-07-09Run test_suite directly from MakefilePjotr Prins
2017-07-09Spacing in demo.txtPjotr Prins
2017-07-09Makefile: add OpenBLAS supportPjotr Prins
2017-07-09Tests: more testsPjotr Prins
2017-07-09Tests: added test for univariate and multivariate LMMPjotr Prins
Also added 'make check' command in Makefile and documented in INSTALL.md
2017-07-09Test: check resultPjotr Prins
2017-07-09Add test framework based on shunit2Pjotr Prins
2017-07-08Merge pull request #53 from genenetwork/docPeter Carbonetto
Updated README and created INSTALL.
2017-07-08INSTALL.md: fixed conflictPjotr Prins
2017-07-08README: some links to INSTALL.mdPjotr Prins
2017-07-08Added notes on using makePjotr Prins
2017-07-08Install docPjotr Prins
2017-07-07Merge pull request #51 from genenetwork/spacingPeter Carbonetto
Spacing fixes.
2017-07-07Bumped up version; added Pjotr to README.Peter Carbonetto
2017-07-07Merge branch 'master' of github.com:xiangzhou/GEMMAPeter Carbonetto
2017-07-07Merge pull request #50 from genenetwork/fixes-gnu-compilePeter Carbonetto
Fixes gnu compile.
2017-07-07Merge branch 'master' of github.com:xiangzhou/GEMMAPeter Carbonetto
2017-07-07Merge pull request #48 from genenetwork/fixesPeter Carbonetto
Makefile: find include files for Eigen3.
2017-07-07Removed FORCE_FLOAT from mvlmm.cpp.Peter Carbonetto
2017-07-07Added notes on using makePjotr Prins
2017-07-07Install docPjotr Prins
2017-07-07Fix spacingPjotr Prins
2017-07-07Some three compile time fixes for the GNU GCC 7.1.0 compiler on Linux.Pjotr Prins
This patch is a mess because we use different line endings. I propose to convert to standard Unix mode (as was the original GEMMA code). To convert with vim one can use set fileformat=unix Do not merge this pull request, we can handle te fixes later.
2017-07-07Makefile: find include files for Eigen3Pjotr Prins
2017-07-04Merge pull request #47 from Millak/masterPeter Carbonetto
Add NO_INTEL_COMPAT flag to Makefile.
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