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PanGEMMA: Genome-wide Efficient Mixed Model Association
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2017-08-02
Merge pull request #62 from genenetwork/spacing
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Spacing and coding style.
Peter Carbonetto
2017-08-02
Added section on contributing and coding style and fixed compilation
Pjotr Prins
2017-08-02
Massive patch using LLVM coding style. It was generated with:
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clang-format -style=LLVM -i *.cpp *.h Please set your editor to replace tabs with spaces and use indentation of 2 spaces.
Pjotr Prins
2017-07-27
Added note about GSL version in installation instructions.
Peter Carbonetto
2017-07-27
Merge branch 'master' of github.com:genetics-statistics/GEMMA.
Peter Carbonetto
2017-07-27
Linking to gemma 2.21 instead of gsl 2.2.1 in Makefile.linux.
Peter Carbonetto
2017-07-27
Made a couple small adjustments to Makefile.macosx.
Peter Carbonetto
2017-07-27
Updated version to 0.97.
Peter Carbonetto
2017-07-26
Fixed link in README.
Peter Carbonetto
2017-07-26
Merge pull request #60 from genenetwork/tests.
Peter Carbonetto
2017-07-26
test_suite: run shunit2 from system when available
Pjotr Prins
2017-07-26
test_suite: replace awk with perl to compute file contents and default to shu...
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fixes https://github.com/genetics-statistics/GEMMA/issues/55
Pjotr Prins
2017-07-26
Added a line count test for K
Pjotr Prins
2017-07-26
github: fix links to gemma repo
Pjotr Prins
2017-07-21
Added note in README about LGPL license for shuint2.
Peter Carbonetto
2017-07-21
Removed some more commented-out code from mvlmm.cpp.
Peter Carbonetto
2017-07-19
Removed some commented out code from mvlmm.cpp.
Peter Carbonetto
2017-07-18
Moved shunit2 files to test directory.
Peter Carbonetto
2017-07-18
Fixed failing test. New test report summary:
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tests passed: 13 tests failed: 0 tests total: 13 success rate: 100%
Peter Carbonetto
2017-07-18
Added shunint2 v2.0.3 files.
Peter Carbonetto
2017-07-18
Merge pull request #56 from genenetwork/compiler-warnings
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Compiler warnings are optional.
Peter Carbonetto
2017-07-18
Merge pull request #54 from genenetwork/tests
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Added test suite, make check and openblas support. Need to fix one test that is still failing.
Peter Carbonetto
2017-07-16
sunit2: added instructions
Pjotr Prins
2017-07-12
Update README.md
xiangzhou
2017-07-11
Makefile: add extra slash to support relative eigen paths
Pjotr Prins
2017-07-11
Makefile: silence compiler warnings for Eigen libs
Pjotr Prins
2017-07-11
Makefile: compiler warnings optional
Pjotr Prins
2017-07-11
Makefile: compile without -Weffc++ as suggested by https://stackoverflow.com/...
Pjotr Prins
2017-07-09
Makefile: fix output on make check
Pjotr Prins
2017-07-09
Makefile: force unit tests to throw a make error on less than 100% success
Pjotr Prins
2017-07-09
Run test_suite directly from Makefile
Pjotr Prins
2017-07-09
Spacing in demo.txt
Pjotr Prins
2017-07-09
Makefile: add OpenBLAS support
Pjotr Prins
2017-07-09
Tests: more tests
Pjotr Prins
2017-07-09
Tests: added test for univariate and multivariate LMM
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Also added 'make check' command in Makefile and documented in INSTALL.md
Pjotr Prins
2017-07-09
Test: check result
Pjotr Prins
2017-07-09
Add test framework based on shunit2
Pjotr Prins
2017-07-08
Merge pull request #53 from genenetwork/doc
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Updated README and created INSTALL.
Peter Carbonetto
2017-07-08
INSTALL.md: fixed conflict
Pjotr Prins
2017-07-08
README: some links to INSTALL.md
Pjotr Prins
2017-07-08
Added notes on using make
Pjotr Prins
2017-07-08
Install doc
Pjotr Prins
2017-07-07
Merge pull request #51 from genenetwork/spacing
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Spacing fixes.
Peter Carbonetto
2017-07-07
Bumped up version; added Pjotr to README.
Peter Carbonetto
2017-07-07
Merge branch 'master' of github.com:xiangzhou/GEMMA
Peter Carbonetto
2017-07-07
Merge pull request #50 from genenetwork/fixes-gnu-compile
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Fixes gnu compile.
Peter Carbonetto
2017-07-07
Merge branch 'master' of github.com:xiangzhou/GEMMA
Peter Carbonetto
2017-07-07
Merge pull request #48 from genenetwork/fixes
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Makefile: find include files for Eigen3.
Peter Carbonetto
2017-07-07
Removed FORCE_FLOAT from mvlmm.cpp.
Peter Carbonetto
2017-07-07
Added notes on using make
Pjotr Prins
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