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2025-05-19Add some notes for later.Frederick Muriuki Muriithi
2025-05-19Save numeric/computational data for phenotypes.Frederick Muriuki Muriithi
2025-05-19Retrieve samples' details from the database.Frederick Muriuki Muriithi
2025-05-19Use correct files for basic phenotypes data. Add notes to self.Frederick Muriuki Muriithi
2025-05-19Rework order of execution of potential steps.Frederick Muriuki Muriithi
2025-05-19Cleanup function call.Frederick Muriuki Muriithi
2025-05-19Fetch next available PublishXRef.DataId value for the phenotypes.Frederick Muriuki Muriithi
2025-05-19Save the basic phenotypes data into the database.Frederick Muriuki Muriithi
2025-05-19Pass Connection rather than Cursor: Transaction is maintained.Frederick Muriuki Muriithi
2025-05-19Initialise function to save publicationsFrederick Muriuki Muriithi
2025-05-12Wireframe saving the data into the database.Frederick Muriuki Muriithi
2025-05-12Print out progress to STDOUT.Frederick Muriuki Muriithi
2025-05-12Pass in the logger, rather than the name of the logger.Frederick Muriuki Muriithi
2025-05-12Handle exceptions within the `with` to prevent silent failureFrederick Muriuki Muriithi
2025-05-12Allow lowercase versions of the log-level choices.Frederick Muriuki Muriithi
2025-05-05Init setup and script for async job to load phenotypes into databaseFrederick Muriuki Muriithi
2025-04-25Handle exceptions explicitlyFrederick Muriuki Muriithi
2025-04-14Setup module-level loggers.Frederick Muriuki Muriithi
2025-04-14Compute data differences in the script.Frederick Muriuki Muriithi
2025-04-14Convert values to float where present.Frederick Muriuki Muriithi
2025-04-14Move difference computation to `run()` function.Frederick Muriuki Muriithi
2025-04-14Update existing linked publication(s) rather than creating new.Frederick Muriuki Muriithi
2025-04-14Compute new PubMed IDs.Frederick Muriuki Muriithi
2025-04-14Update imports.Frederick Muriuki Muriithi
2025-04-14Compute differences with tested function.Frederick Muriuki Muriithi
2025-04-14Move code to save new publications to database.Frederick Muriuki Muriithi
2025-04-11Move code to fetch phenotype publications from DB to publications package.Frederick Muriuki Muriithi
2025-04-11Move code to fetch publications from pubmed to publications module.Frederick Muriuki Muriithi
2025-04-09Convert PubMed_ID value from file to intFrederick Muriuki Muriithi
2025-04-09Compute publications differences.Frederick Muriuki Muriithi
2025-04-09Save new publications retrieved from NCBI's PubMed database.Frederick Muriuki Muriithi
2025-04-09Retrieve publication information from NCBI.Frederick Muriuki Muriithi
2025-04-09Fix typo.Frederick Muriuki Muriithi
2025-04-09Check whether there are new PubMed IDs before beginning the fetch.Frederick Muriuki Muriithi
2025-03-26Pass PubMed IDs from the file to difference computation function.Frederick Muriuki Muriithi
2025-03-26Add function to compute publication differences.Frederick Muriuki Muriithi
2025-03-26Partial implementation: Fetch publications from NCBI.Frederick Muriuki Muriithi
2025-03-26Fetch existing publications from the database.Frederick Muriuki Muriithi
2025-03-26Compute differences in the descriptions.Frederick Muriuki Muriithi
2025-03-26Replaces empty strings with NoneFrederick Muriuki Muriithi
2025-03-26Collect IDs once at the top-level call to save on iterations.Frederick Muriuki Muriithi
2025-03-26Check whether the IDs are valid.Frederick Muriuki Muriithi
2025-03-25Add function to read the file and do basic data processing.Frederick Muriuki Muriithi
2025-03-25Initialise background script to handle bulk edits.Frederick Muriuki Muriithi
2025-01-28Remove obsoleted script.Frederick Muriuki Muriithi
2025-01-23Ensure names are lowercase for comparison purposes.Frederick Muriuki Muriithi
2024-12-03Fix some linting and mypy issues.Frederick Muriuki Muriithi
2024-12-03Improve error textFrederick Muriuki Muriithi
2024-12-03Update file metadata using a mappingFrederick Muriuki Muriithi
2024-12-03Provide consistent way to build file-specific fully-qualified keysFrederick Muriuki Muriithi
generated by cgit-pink 1.4.1 (git 2.36.1) at 2026-01-09 11:25:34 +0000