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| author | Frederick Muriuki Muriithi | 2025-04-09 10:20:48 -0500 |
|---|---|---|
| committer | Frederick Muriuki Muriithi | 2025-04-09 10:20:48 -0500 |
| commit | a578770d6d6d8cfa755d113d95d0bad27b143110 (patch) | |
| tree | e8e750582a1bbc75153160706e25d9e43989ceca /scripts | |
| parent | d490dccf4717c2817a2070f7354af18a6b5be825 (diff) | |
| download | gn-uploader-a578770d6d6d8cfa755d113d95d0bad27b143110.tar.gz | |
Check whether there are new PubMed IDs before beginning the fetch.
Diffstat (limited to 'scripts')
| -rw-r--r-- | scripts/phenotypes_bulk_edit.py | 4 |
1 files changed, 4 insertions, 0 deletions
diff --git a/scripts/phenotypes_bulk_edit.py b/scripts/phenotypes_bulk_edit.py index b647199..c0174be 100644 --- a/scripts/phenotypes_bulk_edit.py +++ b/scripts/phenotypes_bulk_edit.py @@ -107,6 +107,10 @@ def __fetch_new_pubmed_ids__(pubmed_ids): # See whether we can retrieve multiple publications in one go # Parse data and save to DB # Return PublicationId(s) for new publication(s). + if len(pubmed_ids) == 0: + logger.debug("There are no new PubMed IDs to fetch") + return tuple() + logger.info("Fetching publications data for the following PubMed IDs: %s", ", ".join(pubmed_ids)) |