Add function to compute publication differences.

1 files changed, 11 insertions, 0 deletions

diff --git a/scripts/phenotypes_bulk_edit.py b/scripts/phenotypes_bulk_edit.py
index 175282e..269f15e 100644
--- a/scripts/phenotypes_bulk_edit.py
+++ b/scripts/phenotypes_bulk_edit.py
@@ -135,6 +135,17 @@ def __fetch_new_pubmed_ids__(pubmed_ids):
     return tuple()
 
 
+def publications_differences(file_data, db_data, pubmed_ids):
+    """Compute differences in the publications."""
+    logger.info("Computing differences in publications.")
+    db_pubmed_ids = reduce(lambda coll, curr: coll.union(set([curr["PubMed_ID"]])),
+                           db_data,
+                           set([None]))
+    new_pubmeds = __fetch_new_pubmed_ids__(tuple(
+        pubmed_ids.difference(db_pubmed_ids)))
+    pass
+
+
     """Compute differences between data in DB and edited data."""
     logger.info("Computing differences.")
     # 1. Basic Phenotype data differences