aboutsummaryrefslogtreecommitdiff
path: root/qc_app/upload
AgeCommit message (Expand)Author
2024-02-15Provide the log messages to the status page.Frederick Muriuki Muriithi
2024-02-13Provide nice UI progress indicators.Frederick Muriuki Muriithi
2024-02-12Check for errors in the 'phenose' file.Frederick Muriuki Muriithi
2024-02-12Collect and display errors on 'geno' files in the bundle.Frederick Muriuki Muriithi
2024-02-12UI: Provide QC successful results pageFrederick Muriuki Muriithi
2024-02-12Retrive and display generic bundle errors...Implement the first QC check for generic errors e.g. missing files in bundle, etc. Display retrieved errors on UI. Frederick Muriuki Muriithi
2024-02-12Raise error if file is missing rather than returning a Union value.Frederick Muriuki Muriithi
2024-02-12R/qtl2 QC: Set up scaffolding for QC UI...Set up the scaffolding for the flows and UI that will be used when running QC against the uploaded R/qtl2 bundle. This will be fleshed out later, and the UI is likely to change somewhat, down the line. Frederick Muriuki Muriithi
2024-02-07ShortName is optional, remove check and set default...The ShortName is optional, and can be set to the same value as Name. This commit removes the check that made it mandatory. Frederick Muriuki Muriithi
2024-02-07Prevent infinite redirect.Frederick Muriuki Muriithi
2024-02-07Fix error display: setup correct error classFrederick Muriuki Muriithi
2024-02-06Bug: Fix routing issues...Fix the routing issues that were redirecting the flow to the wrong endpoints. Frederick Muriuki Muriithi
2024-02-05Fix linting and type errors.Frederick Muriuki Muriithi
2024-02-05Do general bundle validation and show errors...* Display any and all errors on the UI * Move `validate_bundle` to QC module and refactor to use `missing_files` Frederick Muriuki Muriithi
2024-01-23Update scripts to use redis prefix.Frederick Muriuki Muriithi
2024-01-22scripts: Pass in logger to get detailed updates.Frederick Muriuki Muriithi
2024-01-22UI: Show progress of R/qtl2 bundle processing.Frederick Muriuki Muriithi
2024-01-19scripts: Process R/qtl2 bundle...Build script to start the processing of the R/qtl2 bundle. Frederick Muriuki Muriithi
2024-01-18UI: Display summary information.Frederick Muriuki Muriithi
2024-01-18UI: Create new ProbeSet dataset.Frederick Muriuki Muriithi
2024-01-18UI: Select from existing ProbeSet datasets.Frederick Muriuki Muriithi
2024-01-18Create new ProbeSet study.Frederick Muriuki Muriithi
2024-01-17UI: Select ProbeSet study.Frederick Muriuki Muriithi
2024-01-17UI: Implement creating new genotype datasets.Frederick Muriuki Muriithi
2024-01-17UI: Initialise summary page.Frederick Muriuki Muriithi
2024-01-17Enable selecting from existing genotype datasets.Frederick Muriuki Muriithi
2024-01-17Update flash-messages' categories.Frederick Muriuki Muriithi
2024-01-16UI: Create UI for creating a new Genotype dataset.Frederick Muriuki Muriithi
2024-01-16UI: Create UI to select from existing genotype datasets.Frederick Muriuki Muriithi
2024-01-16Create intermediate step...We do not have the option to modify the request and then redirect with the modification in place. To go around that, this commit creates an intermediate step that informs the user of their progress, while allowing us to store the filename for future steps. Frederick Muriuki Muriithi
2024-01-08Fix errors with types.Frederick Muriuki Muriithi
2024-01-08Upload R/qtl2 zip bundle and check for errors.Frederick Muriuki Muriithi
2024-01-08Implement "create-population" route.Frederick Muriuki Muriithi
2024-01-08Implement "POST" path for "select-population" route.Frederick Muriuki Muriithi
2024-01-08Use extracted functions and fix bugsFrederick Muriuki Muriithi
2024-01-05UI to select the population under which the data falls.Frederick Muriuki Muriithi
2024-01-05Initialise R/qtl2 bundle upload path...Initialise the upload path for R/qtl2 bundles. This commit adds UI that allows the user to select from existing species, before proceeding to the next stage. Frederick Muriuki Muriithi