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| author | Frederick Muriuki Muriithi | 2024-02-10 06:57:23 +0300 |
|---|---|---|
| committer | Frederick Muriuki Muriithi | 2024-02-12 18:17:40 +0300 |
| commit | 4729abd0ab7a8fbeb700a278ac8bdfcf62ab79ac (patch) | |
| tree | b9fbf2d0a312afcc0336d8ee3d3d97d1673a229a /qc_app/upload | |
| parent | 445a28579e2139654132643cf9595acfd402c283 (diff) | |
| download | gn-uploader-4729abd0ab7a8fbeb700a278ac8bdfcf62ab79ac.tar.gz | |
Collect and display errors on 'geno' files in the bundle.
Diffstat (limited to 'qc_app/upload')
| -rw-r--r-- | qc_app/upload/rqtl2.py | 6 |
1 files changed, 6 insertions, 0 deletions
diff --git a/qc_app/upload/rqtl2.py b/qc_app/upload/rqtl2.py index 4b00891..c45952c 100644 --- a/qc_app/upload/rqtl2.py +++ b/qc_app/upload/rqtl2.py @@ -207,6 +207,12 @@ def rqtl2_bundle_qc_status(jobid: UUID): job=thejob, errorsgeneric=json.loads( thejob.get("errors-generic", "[]")), + errorsgeno=json.loads( + thejob.get("errors-geno", "[]")), + errorspheno=json.loads( + thejob.get("errors-pheno", "[]")), + errorsphenocovar=json.loads( + thejob.get("errors-phenocovar", "[]")), messages=logmessages) if jobstatus == "success": jobmeta = json.loads(thejob["job-metadata"]) |