guix-bioinformatics - Bioinformatics packages for GNU Guix

Age	Commit message (Expand)	Author
22 hours	Moving patches around so we can use loadpath again HEAD main	pjotrp
24 hours	Patch (opensmtp) because it fails on sendmail -t	pjotrp
27 hours	● All part1.md tutorial steps reproduce successfully:	pjotrp
28 hours	- cigzip (binary, 0.1.0-b7cc0ed) -- successfully packaged and added to pang...	pjotrp
2 days	● All 29 packages in manifest.scm.example built successfully! No failures.	pjotrp
2 days	Added (pangenomes) rtg-tools	pjotrp
2 days	Add (pangenomes) gfalook	pjotrp
2 days	Added (pangenome) pafplot	pjotrp
2 days	Adding packages for the mempang workshop	pjotrp
3 days	Mempang25 workshop	pjotrp
3 days	Added bandageNG	pjotrp
3 days	Added vg package back in	pjotrp
3 days	Allow tuning rust packages	pjotrp
3 days	Re-add vcflib package	pjotrp
7 days	pangenome: impg: updated to latest commit	pjotrp
7 days	Make tools tunable (pangenome)	pjotrp
8 days	Allow for tuning of C++ and Rust packages --tune=native	pjotrp
8 days	Make these pangenome packages tunable	pjotrp
8 days	New package (pangenomes) meta-package	pjotrp
9 days	Rename channels.scm to avoid guix pull compilation error [AI]	pjotrp
10 days	Propagate snakemake (cosigt)	pjotrp
10 days	Fix cosigt propagation for workflow and missing getopts in pggb	pjotrp
13 days	Add test (impg) integration test	pjotrp
14 days	Propagate fastga-rs in impg	pjotrp
2026-04-04	Downgraded (wfmash) from 0.24 to 0.14. Pggb requires that. Cosigt tests:	pjotrp
2026-04-04	Update tests so they pass for cosigt	pjotrp
2026-04-03	Add wfmash recent	pjotrp
2026-04-03	Get pangenome tools going again	pjotrp
2026-04-03	Working on cosigt and odgi (WIP)	pjotrp
2026-04-02	Enable tests (impg)	pjotrp
2026-04-02	Getting rid of guix-past dependency	pjotrp
2026-04-02	Get rid of python-nose warning	pjotrp
2026-04-02	Updated (impg) to latest with dependencies	pjotrp
2026-04-02	Milestone achieved: guix-bioinformatics no longer depends on guix-rust-past-c...	pjotrp
2026-04-02	More surgery:	pjotrp
2026-04-02	Updated rust package for qtlreaper	pjotrp
2026-04-02	Move (gfaffix) to rust package	pjotrp
2026-04-02	Changed URLs for Chris packages	pjotrp
2026-04-02	Updated (gfautil) to latest rust packaging	pjotrp
2026-04-02	Moved all pangenome Rust packages to pangenome-rust.scm	pjotrp
2026-04-02	Added a number of packages for cosigt/impg:	pjotrp
2026-03-24	Fixes after a recent guix pull	pjotrp
2026-03-24	pylmm-gn2 moved to past	pjotrp
2026-03-23	Packages reintroduced for GN	pjotrp
2026-03-23	Moving failing packages out	pjotrp
2026-03-23	Fixes to build	pjotrp
2026-03-22	Fix (julia) packages by disabling tests (sorry)	pjotrp
2026-03-22	Fixed (node) by removing dev dependencies before install	pjotrp
2026-03-22	Drop unused GN and lizardfs packages	pjotrp
2026-03-22	Fixes builds	pjotrp