guix-bioinformatics - Bioinformatics packages for GNU Guix

Age	Commit message (Expand)	Author
40 hours	pangenome: impg: updated to latest commit HEAD main	pjotrp
40 hours	Make tools tunable (pangenome)	pjotrp
2 days	Allow for tuning of C++ and Rust packages --tune=native	pjotrp
2 days	Make these pangenome packages tunable	pjotrp
3 days	New package (pangenomes) meta-package	pjotrp
4 days	Rename channels.scm to avoid guix pull compilation error [AI]	pjotrp
5 days	Propagate snakemake (cosigt)	pjotrp
5 days	Fix cosigt propagation for workflow and missing getopts in pggb	pjotrp
8 days	Add test (impg) integration test	pjotrp
8 days	Propagate fastga-rs in impg	pjotrp
9 days	Downgraded (wfmash) from 0.24 to 0.14. Pggb requires that. Cosigt tests:	pjotrp
9 days	Update tests so they pass for cosigt	pjotrp
9 days	Add wfmash recent	pjotrp
9 days	Get pangenome tools going again	pjotrp
9 days	Working on cosigt and odgi (WIP)	pjotrp
10 days	Enable tests (impg)	pjotrp
10 days	Getting rid of guix-past dependency	pjotrp
10 days	Get rid of python-nose warning	pjotrp
10 days	Updated (impg) to latest with dependencies	pjotrp
10 days	Milestone achieved: guix-bioinformatics no longer depends on guix-rust-past-c...	pjotrp
11 days	More surgery:	pjotrp
11 days	Updated rust package for qtlreaper	pjotrp
11 days	Move (gfaffix) to rust package	pjotrp
11 days	Changed URLs for Chris packages	pjotrp
11 days	Updated (gfautil) to latest rust packaging	pjotrp
11 days	Moved all pangenome Rust packages to pangenome-rust.scm	pjotrp
11 days	Added a number of packages for cosigt/impg:	pjotrp
2026-03-24	Fixes after a recent guix pull	pjotrp
2026-03-24	pylmm-gn2 moved to past	pjotrp
2026-03-23	Packages reintroduced for GN	pjotrp
2026-03-23	Moving failing packages out	pjotrp
2026-03-23	Fixes to build	pjotrp
2026-03-22	Fix (julia) packages by disabling tests (sorry)	pjotrp
2026-03-22	Fixed (node) by removing dev dependencies before install	pjotrp
2026-03-22	Drop unused GN and lizardfs packages	pjotrp
2026-03-22	Fixes builds	pjotrp
2026-03-22	fix (genenetwork2) build.	pjotrp
2026-03-22	Moving to guix-bioinformatics-past	pjotrp
2026-03-22	move patches	pjotrp
2026-03-22	Removed (delly)	pjotrp
2026-03-22	Mark RISC-V packages as obsolete	pjotrp
2026-03-22	Continue cleanup	pjotrp
2026-03-22	Delete older files	pjotrp
2026-03-22	Moved redundant and older packages to new repo: guix-bioinformatics-past. It ...	pjotrp
2026-03-22	Moving (genenetwork1, lisp) packages to guix-bioinformatics-past repo	pjotrp
2026-03-22	update (pggb_) pggb 0.7.4 built successfully	pjotrp
2026-03-22	Update (vg) to 1.72.0 and merged dev vg-gn package	pjotrp
2026-03-21	Fix (vg) v1.65.0 with vcflib build [AI]	pjotrp
2026-03-21	Fix (vcflib) upgrade to latest 1.0.15	pjotrp
2026-03-21	Bump (vcflib) version to 1.0.15. Remove wfa2-lib-static package	pjotrp