diff options
Diffstat (limited to 'gn')
| -rw-r--r-- | gn/packages/bioinformatics.scm | 12 |
1 files changed, 7 insertions, 5 deletions
diff --git a/gn/packages/bioinformatics.scm b/gn/packages/bioinformatics.scm index 7a7d0de..a1de4b2 100644 --- a/gn/packages/bioinformatics.scm +++ b/gn/packages/bioinformatics.scm @@ -2358,16 +2358,18 @@ sequences to accelerate the alignment process.") (uri (git-reference (url "https://github.com/vcflib/vcflib") (commit (string-append "v" version)) - (recursive? #t))) ; some sources are included in the build + (recursive? #t))) (file-name (git-file-name name version)) (sha256 (base32 - "0chpjd3g70jc0kwpf141z7rgm9i8pd8xxr1bfywyn15zfry774xa")))) + "04gwnwvr10z6kc0f4n25a5dhw4jl4i2mqfxyy1kxmqbl1dw1b20k")) + (patches + (list (search-patch "vcflib-use-system-fastahack-smithwaterman.patch"))))) (build-system cmake-build-system) (inputs (list - fastahack - htslib + fastahack + htslib pandoc ; for man pages perl python @@ -2381,7 +2383,7 @@ sequences to accelerate the alignment process.") xz zig-0.15)) ; older versions of zig will not work (native-inputs - `(("pkg-config" ,pkg-config))) + (list pkg-config)) (home-page "https://github.com/vcflib/vcflib/") (synopsis "Library for parsing and manipulating VCF files") (description "Vcflib provides methods to manipulate and interpret |