about summary refs log tree commit diff
AgeCommit message (Expand)Author
3 daysmempang-workshop: Add gawk and which to propagated-inputs HEAD mainwrk
3 daysmbg: Unbundle recursive git submodule and use system parallel-hashmapwrk
3 daysUnbundling recursive git submoduleswrk
2026-04-20Fix pathpjotrp
2026-04-19READMEpjotrp
2026-04-19The guix-bioinformatics README.org now has a comprehensive overview with thre...pjotrp
2026-04-19Add (pangenome) agc packagepjotrp
2026-04-18Downgrade to wfmash-0.14 for mempang and add tools for the workshoppjotrp
2026-04-17Moving patches around so we can use loadpath againpjotrp
2026-04-17Patch (opensmtp) because it fails on sendmail -tpjotrp
2026-04-17● All part1.md tutorial steps reproduce successfully:pjotrp
2026-04-17 - cigzip (binary, 0.1.0-b7cc0ed) -- successfully packaged and added to pang...pjotrp
2026-04-16● All 29 packages in manifest.scm.example built successfully! No failures.pjotrp
2026-04-16Added (pangenomes) rtg-toolspjotrp
2026-04-16Add (pangenomes) gfalookpjotrp
2026-04-16Added (pangenome) pafplotpjotrp
2026-04-16Adding packages for the mempang workshoppjotrp
2026-04-15Mempang25 workshoppjotrp
2026-04-15Added bandageNGpjotrp
2026-04-15Added vg package back inpjotrp
2026-04-15Allow tuning rust packagespjotrp
2026-04-15Re-add vcflib packagepjotrp
2026-04-13README: add --tune=native switchpjotrp
2026-04-11pangenome: impg: updated to latest commitpjotrp
2026-04-11Make tools tunable (pangenome)pjotrp
2026-04-10Allow for tuning of C++ and Rust packages --tune=nativepjotrp
2026-04-10Make these pangenome packages tunablepjotrp
2026-04-10New package (pangenomes) meta-packagepjotrp
2026-04-09Rename channels.scm to avoid guix pull compilation error [AI]pjotrp
2026-04-08Propagate snakemake (cosigt)pjotrp
2026-04-08Fix cosigt propagation for workflow and missing getopts in pggbpjotrp
2026-04-08Example (channels.scm)pjotrp
2026-04-05Add test (impg) integration testpjotrp
2026-04-04Propagate fastga-rs in impgpjotrp
2026-04-04Add genecup to manifestpjotrp
2026-04-04Add manifest.scm to build all critical packagespjotrp
2026-04-04Downgraded (wfmash) from 0.24 to 0.14. Pggb requires that. Cosigt tests:pjotrp
2026-04-04Update tests so they pass for cosigtpjotrp
2026-04-03Add wfmash recentpjotrp
2026-04-03Get pangenome tools going againpjotrp
2026-04-03Working on cosigt and odgi (WIP)pjotrp
2026-04-02Enable tests (impg)pjotrp
2026-04-02Getting rid of guix-past dependencypjotrp
2026-04-02Getting rid of guix-past dependencypjotrp
2026-04-02Getting rid of guix-past dependencypjotrp
2026-04-02Get rid of python-nose warningpjotrp
2026-04-02Updated (impg) to latest with dependenciespjotrp
2026-04-02Remove guix-rust-past from default channelpjotrp
2026-04-02Milestone achieved: guix-bioinformatics no longer depends on guix-rust-past-c...pjotrp
2026-04-02More surgery:pjotrp
generated by cgit-pink 1.4.1 (git 2.36.1) at 2026-05-05 01:43:30 +0000