index
:
gn-uploader
this commit
keyring
main
provide-background-qtlreaper-job
rework-species-selection
gn-uploader: Data uploader for GeneNetwork
about
summary
refs
log
tree
commit
diff
log msg
author
committer
range
path:
root
/
tests
Age
Commit message (
Expand
)
Author
2025-05-02
Mark directories as packages to make modules unique.
Frederick Muriuki Muriithi
2025-04-14
Implement difference computations.
Frederick Muriuki Muriithi
2025-04-14
Add tests for new difference computation function.
Frederick Muriuki Muriithi
2025-04-14
Move test to appropriate package.
Frederick Muriuki Muriithi
2025-04-14
Rename test module.
Frederick Muriuki Muriithi
2025-04-11
Write test for computing differences for publications in bulk edits.
Frederick Muriuki Muriithi
2025-04-11
Setup client for use with tests.
Frederick Muriuki Muriithi
2024-10-17
Add test for function to compute file hash.
Frederick Muriuki Muriithi
2024-10-17
Rename test module.
Frederick Muriuki Muriithi
2024-07-25
Rename module: qc_app --> uploader
Frederick Muriuki Muriithi
2024-06-27
Remove unnecessary debugging statements.
Frederick Muriuki Muriithi
2024-06-14
Commit missing test.
Frederick Muriuki Muriithi
2024-06-13
Fix tests and issues caught by tests.
Frederick Muriuki Muriithi
2024-04-08
Fix issues caught by integration tests.
Frederick Muriuki Muriithi
2024-02-28
tests: test with just the message - don't include markup
Frederick Muriuki Muriithi
2024-02-28
tests: Update unit tests: remove use of obsoleted functions.
Frederick Muriuki Muriithi
2024-02-20
Track filename in the errors
Frederick Muriuki Muriithi
2024-02-20
Generalise fetching of samples/cases/individuals.
Frederick Muriuki Muriithi
2024-02-20
Read samples from geno file.
Frederick Muriuki Muriithi
2024-02-12
Build generic decimal places checker.
Frederick Muriuki Muriithi
2024-02-12
Provide the key for each file listed in the control file.
Frederick Muriuki Muriithi
2024-02-08
Use error objects rather than plain tuple values.
Frederick Muriuki Muriithi
2024-02-06
Check that pheno values are numerical and at least 3 decimal places
Frederick Muriuki Muriithi
2024-02-05
Check that data in geno file is valid
Frederick Muriuki Muriithi
2024-02-05
Fix linting and type errors.
Frederick Muriuki Muriithi
2024-02-05
Retrieve list of all files, and list of missing files
Frederick Muriuki Muriithi
2024-02-02
Ensure control file defaults are set up in code.
Frederick Muriuki Muriithi
2024-01-24
Checks: Update code and tests to ensure all checks pass.
Frederick Muriuki Muriithi
2024-01-23
Tests: Use prefixes in tests rather than starting redis server
Frederick Muriuki Muriithi
2024-01-20
Fetch sample/case names from database
Frederick Muriuki Muriithi
2024-01-15
Update imports: `take` was moved to different package.
Frederick Muriuki Muriithi
2024-01-15
Process `na.strings` even for default cases
Frederick Muriuki Muriithi
2024-01-10
Make identifier column name explicit
Frederick Muriuki Muriithi
2024-01-09
Raise exception on reading non-existing file
Frederick Muriuki Muriithi
2024-01-05
Add missing import.
Frederick Muriuki Muriithi
2024-01-05
Revert "QC: Check for only one decimal place."
Frederick Muriuki Muriithi
2024-01-04
Parse sex information from R/qtl bundle.
Frederick Muriuki Muriithi
2024-01-04
Parse cross information from R/qtl2 bundle.
Frederick Muriuki Muriithi
2024-01-04
Process sex and cross information data in "covar" files.
Frederick Muriuki Muriithi
2024-01-04
Rename test module
Frederick Muriuki Muriithi
2024-01-04
Parse multiple files with same file key.
Frederick Muriuki Muriithi
2024-01-04
Test parsing of multiple files for single key
Frederick Muriuki Muriithi
2024-01-04
Add tests for parsing cross information (covar) files.
Frederick Muriuki Muriithi
2024-01-04
Add tests for parsing 'phenocovar' files.
Frederick Muriuki Muriithi
2024-01-04
Rename test module.
Frederick Muriuki Muriithi
2024-01-03
Use generic parser. Remove obsoleted functions.
Frederick Muriuki Muriithi
2024-01-03
Parse founder_geno files. Generalise parsing files.
Frederick Muriuki Muriithi
2024-01-03
Add tests for `founder_geno` parsing.
Frederick Muriuki Muriithi
2024-01-03
Parse the phenotype data from the R/qtl2 bundle.
Frederick Muriuki Muriithi
2024-01-03
Extract processing of transposed files into reusable function.
Frederick Muriuki Muriithi
[next]