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| author | Frederick Muriuki Muriithi | 2025-04-14 15:06:34 -0500 |
|---|---|---|
| committer | Frederick Muriuki Muriithi | 2025-04-14 16:09:21 -0500 |
| commit | 3cd56ff2f774c13add3b5fa791fcc55a0c5f00c3 (patch) | |
| tree | 3ce5c2b2a45f7283738aa30684ecbef83dd5c56f /tests | |
| parent | 4768b837c24aa3622d87c3c6adff112cb975ab20 (diff) | |
| download | gn-uploader-3cd56ff2f774c13add3b5fa791fcc55a0c5f00c3.tar.gz | |
Implement difference computations.
Diffstat (limited to 'tests')
| -rw-r--r-- | tests/uploader/phenotypes/test_misc.py | 24 |
1 files changed, 12 insertions, 12 deletions
diff --git a/tests/uploader/phenotypes/test_misc.py b/tests/uploader/phenotypes/test_misc.py index f333d66..c0261aa 100644 --- a/tests/uploader/phenotypes/test_misc.py +++ b/tests/uploader/phenotypes/test_misc.py @@ -218,12 +218,12 @@ __sample_db_phenotypes_data__ = ( } }), __sample_db_phenotypes_data__, - ({"PhenotypeId": 4, "xref_id": 10001, "DataId": 8967043, "StrainId": 4, "value": 77.2}, - {"PhenotypeId": 15, "xref_id": 10003, "DataId": 8967045, "StrainId": 6, "value": 503}, - {"PhenotypeId": 15, "xref_id": 10003, "DataId": 8967045, "StrainId": 7, "value": 903}, - {"PhenotypeId": 20, "xref_id": 10004, "DataId": 8967046, "StrainId": 3, "value": 1}, - {"PhenotypeId": 20, "xref_id": 10004, "DataId": 8967046, "StrainId": 4, "value": 8}, - {"PhenotypeId": 20, "xref_id": 10004, "DataId": 8967046, "StrainId": 5, "value": 9})), + ({"PhenotypeId": 4, "xref_id": 10001, "DataId": 8967043, "StrainId": 4, "StrainName": "BXD1", "value": 77.2}, + {"PhenotypeId": 15, "xref_id": 10003, "DataId": 8967045, "StrainId": 6, "StrainName": "BXD5", "value": 503}, + {"PhenotypeId": 15, "xref_id": 10003, "DataId": 8967045, "StrainId": 7, "StrainName": "BXD6", "value": 903}, + {"PhenotypeId": 20, "xref_id": 10004, "DataId": 8967046, "StrainId": 3, "StrainName": "DBA/2J", "value": 1}, + {"PhenotypeId": 20, "xref_id": 10004, "DataId": 8967046, "StrainId": 4, "StrainName": "BXD1", "value": 8}, + {"PhenotypeId": 20, "xref_id": 10004, "DataId": 8967046, "StrainId": 5, "StrainName": "BXD2", "value": 9})), # Changes — with deletions (({ @@ -292,12 +292,12 @@ __sample_db_phenotypes_data__ = ( } }), __sample_db_phenotypes_data__, - ({"PhenotypeId": 4, "xref_id": 10001, "DataId": 8967043, "StrainId": 4, "value": None}, - {"PhenotypeId": 15, "xref_id": 10003, "DataId": 8967045, "StrainId": 6, "value": None}, - {"PhenotypeId": 15, "xref_id": 10003, "DataId": 8967045, "StrainId": 7, "value": None}, - {"PhenotypeId": 20, "xref_id": 10004, "DataId": 8967046, "StrainId": 3, "value": 15}, - {"PhenotypeId": 20, "xref_id": 10004, "DataId": 8967046, "StrainId": 4, "value": None}, - {"PhenotypeId": 20, "xref_id": 10004, "DataId": 8967046, "StrainId": 5, "value": 24})))) + ({"PhenotypeId": 4, "xref_id": 10001, "DataId": 8967043, "StrainId": 4, "StrainName": "BXD1", "value": None}, + {"PhenotypeId": 15, "xref_id": 10003, "DataId": 8967045, "StrainId": 6, "StrainName": "BXD5", "value": None}, + {"PhenotypeId": 15, "xref_id": 10003, "DataId": 8967045, "StrainId": 7, "StrainName": "BXD6", "value": None}, + {"PhenotypeId": 20, "xref_id": 10004, "DataId": 8967046, "StrainId": 3, "StrainName": "DBA/2J", "value": 15}, + {"PhenotypeId": 20, "xref_id": 10004, "DataId": 8967046, "StrainId": 4, "StrainName": "BXD1", "value": None}, + {"PhenotypeId": 20, "xref_id": 10004, "DataId": 8967046, "StrainId": 5, "StrainName": "BXD2", "value": 24})))) def test_phenotypes_data_differences(filedata, dbdata, expected): """Test differences are computed correctly.""" assert phenotypes_data_differences(filedata, dbdata) == expected |