| Age | Commit message (Expand) | Author |
|---|---|---|
| 2024-12-03 | Pass the redis connection and fully qualified job id...Pass the redis connection on to the function used to build main since it might need to use a connection to redis. Also pass the computed fully qualified job id rather than recomputing it every time. Update dependent functions to take the new arguments. | Frederick Muriuki Muriithi |
| 2024-10-24 | Parse entire namespace object rather than individual values. | Frederick Muriuki Muriithi |
| 2024-10-24 | Move logger creation to `build_main` function...Since the module-level loggers are built mostly the same, move the creation of the logger to the more general function to reduce repetition. | Frederick Muriuki Muriithi |
| 2024-08-16 | Log out correct parameters. | Frederick Muriuki Muriithi |
| 2024-08-13 | Bug: cross reference with NULL cM when "gmap" file is absent...The "gmap" file might not exist in some bundles. In those instances, cross-reference the data without including the genotypes' physical positions (cM). | Frederick Muriuki Muriithi |
| 2024-08-08 | Fix bugs and pass in logger to functions. | Frederick Muriuki Muriithi |
| 2024-08-06 | Pass logger on to inner functions...Pass the logger forward to inner functions to help with debugging things. | Frederick Muriuki Muriithi |
| 2024-07-05 | bug: Return a hashable key, not a dict. | Frederick Muriuki Muriithi |
| 2024-07-02 | Call correct method. | Frederick Muriuki Muriithi |
| 2024-07-02 | Ensure no duplicated values for the query. | Frederick Muriuki Muriithi |
| 2024-04-03 | Reduce size of data inserted per query...Reduce the size of data inserted per query since MariDB allows a packet with a maximum size of 1GB. This should hopefully resolve the …OperationalError: (2006, 'Server has gone away') error. | Frederick Muriuki Muriithi |
| 2024-02-15 | Filter out NULL values | Frederick Muriuki Muriithi |
| 2024-02-05 | Fix linting and type errors. | Frederick Muriuki Muriithi |
| 2024-01-22 | scripts: Pass in logger to get detailed updates. | Frederick Muriuki Muriithi |
| 2024-01-19 | scripts: Process R/qtl2 bundle...Build script to start the processing of the R/qtl2 bundle. | Frederick Muriuki Muriithi |
| 2024-01-15 | Update imports: `take` was moved to different package. | Frederick Muriuki Muriithi |
| 2024-01-15 | Extract common structure into separate modules. | Frederick Muriuki Muriithi |
| 2024-01-11 | Update pmap data in the database. | Frederick Muriuki Muriithi |
| 2024-01-11 | Update gmap data in the database...Update the genetic positions (in centiMorgans) in the database. | Frederick Muriuki Muriithi |
| 2024-01-11 | Cleanup linting and typing errors. | Frederick Muriuki Muriithi |
| 2024-01-11 | CLI: Require datasetid as an argument. | Frederick Muriuki Muriithi |
| 2024-01-10 | Provide convenience functions to avoid subtle call errors | Frederick Muriuki Muriithi |
| 2024-01-10 | Cross-reference genotype data to the dataset. | Frederick Muriuki Muriithi |
| 2024-01-10 | Insert genotype data. | Frederick Muriuki Muriithi |
| 2024-01-10 | Cross-reference individuals to populations. | Frederick Muriuki Muriithi |
| 2024-01-10 | Insert any new individuals/samples into the database. | Frederick Muriuki Muriithi |
| 2024-01-10 | Insert any new markers...Insert any new markers found into the database. | Frederick Muriuki Muriithi |
| 2024-01-09 | WIP: Install genotypes from R/qtl2 bundle...Load the genotype information from the R/qtl2 bundle and insert it into the database. | Frederick Muriuki Muriithi |
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index : gn-uploader | |
| gn-uploader: Data uploader for GeneNetwork |
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