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2025-04-14Update existing linked publication(s) rather than creating new.Frederick Muriuki Muriithi
2025-04-14Log out job command for easier debug.Frederick Muriuki Muriithi
2025-04-14Provide species, population and dataset identifiers as job metadata.Frederick Muriuki Muriithi
2025-04-14Compute new PubMed IDs.Frederick Muriuki Muriithi
2025-04-14Update imports.Frederick Muriuki Muriithi
2025-04-14Return created objects with their IDsFrederick Muriuki Muriithi
2025-04-14Add types for connection objects.Frederick Muriuki Muriithi
2025-04-14Compute differences with tested function.Frederick Muriuki Muriithi
2025-04-14Implement computation for publication differences.Frederick Muriuki Muriithi
2025-04-14Move code to save new publications to database.Frederick Muriuki Muriithi
2025-04-14Rename test module.Frederick Muriuki Muriithi
2025-04-11Fix bug: Provide empty defaults, and fix type.Frederick Muriuki Muriithi
2025-04-11Move code to fetch phenotype publications from DB to publications package.Frederick Muriuki Muriithi
2025-04-11Move code to fetch publications from pubmed to publications module.Frederick Muriuki Muriithi
2025-04-11Write test for computing differences for publications in bulk edits.Frederick Muriuki Muriithi
2025-04-11Setup client for use with tests.Frederick Muriuki Muriithi
2025-04-11Update application initialisation to allow config updates for tests.Frederick Muriuki Muriithi
2025-04-09Convert PubMed_ID value from file to intFrederick Muriuki Muriithi
2025-04-09Compute publications differences.Frederick Muriuki Muriithi
2025-04-09Save new publications retrieved from NCBI's PubMed database.Frederick Muriuki Muriithi
2025-04-09Retrieve publication information from NCBI.Frederick Muriuki Muriithi
2025-04-09Use class from Bootstrap5 for hiding elements.Frederick Muriuki Muriithi
2025-04-09Fix typo.Frederick Muriuki Muriithi
2025-04-09Check whether there are new PubMed IDs before beginning the fetch.Frederick Muriuki Muriithi
2025-04-05Don't clear anonymous sessions with every check for login.Frederick Muriuki Muriithi
2025-04-05Add base "alert" class for alerts for bootstrap 5.Frederick Muriuki Muriithi
2025-04-05Fix fetching of user details.Frederick Muriuki Muriithi
Move the fetching of user details to the client module. Add checks to only fetch the details if they are not updated yet.
2025-04-05Set "logged_in" key together with the token.Frederick Muriuki Muriithi
2025-04-05Override only the user details provided rather than the entire object.Frederick Muriuki Muriithi
2025-03-26Pass PubMed IDs from the file to difference computation function.Frederick Muriuki Muriithi
2025-03-26Add function to compute publication differences.Frederick Muriuki Muriithi
2025-03-26Partial implementation: Fetch publications from NCBI.Frederick Muriuki Muriithi
2025-03-26Fetch existing publications from the database.Frederick Muriuki Muriithi
2025-03-26Pass in system log-level to script.Frederick Muriuki Muriithi
2025-03-26Compute differences in the descriptions.Frederick Muriuki Muriithi
2025-03-26Replaces empty strings with NoneFrederick Muriuki Muriithi
2025-03-26Collect IDs once at the top-level call to save on iterations.Frederick Muriuki Muriithi
2025-03-26Provide connection URI for mariadb.Frederick Muriuki Muriithi
2025-03-26Update comment text.Frederick Muriuki Muriithi
2025-03-26Check whether the IDs are valid.Frederick Muriuki Muriithi
2025-03-25Add function to read the file and do basic data processing.Frederick Muriuki Muriithi
2025-03-25Initialise background script to handle bulk edits.Frederick Muriuki Muriithi
2025-03-25Run job with unbuffered outputs.Frederick Muriuki Muriithi
2025-03-25Update name of launcher script used.Frederick Muriuki Muriithi
2025-03-24Begin processing the uploadeded bulk-edit file.Frederick Muriuki Muriithi
2025-03-24Only allow text/tab-separated-values files to be uploaded.Frederick Muriuki Muriithi
2025-03-24Make name same a id.Frederick Muriuki Muriithi
2025-03-24Initialise jobs package for flask.Frederick Muriuki Muriithi
2025-03-21Add "PubMed_ID" fieldFrederick Muriuki Muriithi
The "PubMed_ID" field allows the user to edit the publication that's attached to each phenotype trait.
2025-03-21Bulk Edit: Initialise the bulk-edit uploadFrederick Muriuki Muriithi
* Provide UI for uploading the file * Provide (partially implemented) endpoint to handle the uploaded file.
generated by cgit v1.2.3 (git 2.47.1) at 2025-05-14 21:24:37 +0000