Allow users to provide transposed files.HEADmain

1 files changed, 2 insertions, 2 deletions

diff --git a/scripts/rqtl2/phenotypes_qc.py b/scripts/rqtl2/phenotypes_qc.py
index 699c291..5c89ca0 100644
--- a/scripts/rqtl2/phenotypes_qc.py
+++ b/scripts/rqtl2/phenotypes_qc.py
@@ -209,12 +209,12 @@ def qc_phenocovar_file(
                     (f"Record {_lc} in file {filepath.name} has a different "
                      "number of columns than the number of headings"))),)
             _line = dict(zip(_headings, line))
-            if not bool(_line["description"]):
+            if not bool(_line.get("description")):
                 _errs = _errs + (
                     save_error(InvalidValue(filepath.name,
                                             _line[_headings[0]],
                                             "description",
-                                            _line["description"],
+                                            _line.get("description"),
                                             "The description is not provided!")),)
 
             rconn.hset(file_fqkey(fqkey, "metadata", filepath),