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| author | Frederick Muriuki Muriithi | 2022-05-05 15:39:32 +0300 |
|---|---|---|
| committer | Frederick Muriuki Muriithi | 2022-05-05 15:39:32 +0300 |
| commit | 90ae44b4b336aa3fbca965da8c1948317714a11a (patch) | |
| tree | 4a8ac85d11934758cc1a3046513c9776681fe268 /guix.scm | |
| parent | 3116206b9eca593323c7e25b200ebc76b9a59f6c (diff) | |
| download | gn-uploader-90ae44b4b336aa3fbca965da8c1948317714a11a.tar.gz | |
Add a guix definition to enable installation
Diffstat (limited to 'guix.scm')
| -rw-r--r-- | guix.scm | 45 |
1 files changed, 45 insertions, 0 deletions
diff --git a/guix.scm b/guix.scm new file mode 100644 index 0000000..acfa307 --- /dev/null +++ b/guix.scm @@ -0,0 +1,45 @@ +(use-modules (guix packages) + (guix git-download) + (gnu packages check) + (gnu packages databases) + (gnu packages python-xyz) + (gnu packages python-web) + (guix build-system python) + (gnu packages python-check) + ((guix licenses) #:prefix license:)) + +(package + (name "genenetwork-qc") + (version "0.0.1") + (source (origin + (method git-fetch) + (uri (git-reference + (url "https://git.genenetwork.org/fredmanglis/gnqc_py.git") + (commit "3116206b9eca593323c7e25b200ebc76b9a59f6c"))) + (sha256 + (base32 + "1q949yvj391b8kdr2a5143gfz1h4p5ig4l3cwcsahz5lq7p93ff0")))) + (build-system python-build-system) + (arguments + `(#:phases + (modify-phases %standard-phases + (replace 'check + (lambda* (#:key tests? #:allow-other-keys) + (when tests? + (invoke "pytest"))))))) + (native-inputs + (list python-mypy + python-pylint + python-pytest + python-hypothesis)) + (propagated-inputs + (list python-rq + python-magic + python-flask + python-jsonpickle)) + (synopsis "GeneNetwork Quality Control Application") + (description + "GeneNetwork qc is a quality control application for the data files that + eventually are used to add to the data in the GeneNetwork project.") + (home-page "https://git.genenetwork.org/fredmanglis/gnqc_py") + (license license:gpl3)) |