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2023-07-21Make dumping optional, defaulting to #tMunyoki Kilyungi
2023-07-21Add table-dump? option to dump-configuration recordMunyoki Kilyungi
2023-07-21Optionally self-document while dumpingMunyoki Kilyungi
2023-07-21Add a configuration record-type for for the define macroMunyoki Kilyungi
2023-07-18Ignore emacs temporary backup filesFrederick Muriuki Muriithi
2023-06-28Updated species.ttlPjotr Prins
2023-06-28Add species mapping to wikidata to schemaPjotr Prins
2023-06-26Add "-m manifest.scm" flag to guix shell commandsMunyoki Kilyungi
2023-06-24Fix documentation errors that were leading to confusionFrederick Muriuki Muriithi
2023-06-24Add some missing dependenciesFrederick Muriuki Muriithi
2023-06-21Fix failing testsMunyoki Kilyungi
2023-06-19Chunk probeset dumpMunyoki Kilyungi
2023-06-15Change the transaction log mode to 'autocommit' when deleting graphMunyoki Kilyungi
2023-06-12Add a dataset's full name when dumpingMunyoki Kilyungi
2023-06-12Use PublishFreeze Name as a fallback for InfoPageNameMunyoki Kilyungi
2023-06-12Annotate a phenotype dataset with 'dataset:Munyoki Kilyungi
2023-06-12Replace "Unknown" in Publication fields with an empty stringMunyoki Kilyungi
2023-06-12Annotate publications without a pmid with "unpublished"Munyoki Kilyungi
2023-06-12Use "publication:" as an identifier for publicationsMunyoki Kilyungi
2023-06-12Remove check for confidentiality/publicity during dataset dumpMunyoki Kilyungi
2023-06-12Add geoPlatfrom to dataset dumpMunyoki Kilyungi
2023-06-12Add missing Species join when dumping datasetsMunyoki Kilyungi
2023-06-12Use the correct title for the a datasetMunyoki Kilyungi
2023-06-12Rename AboutProcessing alias to AboutDataProcessingMunyoki Kilyungi
2023-06-12Replace citations to source from Datasets instead of InfoFilesMunyoki Kilyungi
2023-06-12Rename sql-alias of GN notes during dataset dumpMunyoki Kilyungi
2023-06-12Add rdf defs for datasetOfSpeciesMunyoki Kilyungi
2023-06-12Add publicationTitle to dataset dumpMunyoki Kilyungi
2023-06-12Make geoSeries a link during dataset dumpMunyoki Kilyungi
2023-06-12Minor identation fixMunyoki Kilyungi
2023-06-12Add organization to dataset dumpMunyoki Kilyungi
2023-06-12Use NCBI taxonomy browser instead of uniprotMunyoki Kilyungi
2023-06-12Cast longtext fields to fix broket utf-8 charactersMunyoki Kilyungi
2023-06-12Remove dead commentsMunyoki Kilyungi
2023-06-12Remove "^[Nn]one$" from some fields from the InfoFiles tableMunyoki Kilyungi
2023-06-12Default to InfoFiles with the Dataset being a fallback for citationsMunyoki Kilyungi
2023-06-12Make ((g/ph)enotype/probeset)Dataset subset of DatasetMunyoki Kilyungi
2023-05-30Dump OMIM as a normal string without any annotationMunyoki Kilyungi
2023-05-30Fix broken utf-8 strings in abstract fieldMunyoki Kilyungi
2023-05-30Add probeset as an extra prefixMunyoki Kilyungi
2023-05-30Delete unused prefixesMunyoki Kilyungi
2023-05-30Replace species with inbredSet metadata when dumping info-filesMunyoki Kilyungi
2023-05-30Only dump public dataMunyoki Kilyungi
2023-05-30Allow upleading all files in a directory to virtuosoMunyoki Kilyungi
2023-05-30Replace PUT with a POST when uploading data in virtuosoMunyoki Kilyungi
2023-05-30Sanitize a probeset's descriptionMunyoki Kilyungi
2023-05-30Update the probeset's identifier(object)Munyoki Kilyungi
2023-05-30Make a probeset's tissue multisetMunyoki Kilyungi
2023-05-30Make a probeset's alias a multisetMunyoki Kilyungi
2023-05-30Move probeset metadata used for a given experiment to it's own dumpMunyoki Kilyungi