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authorMunyoki Kilyungi2023-05-31 19:12:55 +0300
committerBonfaceKilz2023-06-12 19:06:36 +0300
commitfefdb26c67d89ff5dfb67b57cd9f29bf4257dffb (patch)
treeb796ebf1a21730450deec92e995c5aac8e2ead85
parentf5ad3e1b7c283d10f605221501cb234cb5933a68 (diff)
downloadgn-transform-databases-fefdb26c67d89ff5dfb67b57cd9f29bf4257dffb.tar.gz
Default to InfoFiles with the Dataset being a fallback for citations
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
-rwxr-xr-xexamples/dump-dataset-metadata.scm15
1 files changed, 14 insertions, 1 deletions
diff --git a/examples/dump-dataset-metadata.scm b/examples/dump-dataset-metadata.scm
index 37e0f2a..042c16a 100755
--- a/examples/dump-dataset-metadata.scm
+++ b/examples/dump-dataset-metadata.scm
@@ -174,7 +174,20 @@
(set gn:experimentDesign (sanitize-rdf-string
(field Datasets ExperimentDesign)))
(set gn:contributors (sanitize-rdf-string (field Datasets Contributors)))
- (set gn:citation (sanitize-rdf-string (field Datasets Citation)))
+ (set gn:citation
+ (sanitize-rdf-string
+ (regexp-substitute/global
+ #f "^[Nn]one$"
+ (field
+ ("CAST(CONVERT(BINARY CONVERT(IFNULL(IF(InfoFiles.Citation = 'None' OR InfoFiles.Citation = '' OR InfoFiles.Citation IS NULL, Datasets.Citation, InfoFiles.Citation), '') USING latin1) USING utf8) AS VARCHAR(1500))"
+ Citation))
+ "")))
+ (set gn:dataSourceAcknowledgment
+ (sanitize-rdf-string
+ (string-trim-both
+ (regexp-substitute/global #f "^[Nn]one$"
+ (field InfoFiles Data_Source_Acknowledge)
+ ""))))
(set gn:acknowledgment (sanitize-rdf-string
(field Datasets Acknowledgment)))))