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Data transformers for GeneNetwork (particularly to RDF)
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2023-07-21
Add table metadata to triple dump
Munyoki Kilyungi
2023-07-21
Add a section sub-heading for schema triples
Munyoki Kilyungi
2023-07-21
Wrap the dump title in quotes
Munyoki Kilyungi
2023-07-21
Replace #` with #'when fetching the name of the defined dump
Munyoki Kilyungi
2023-07-21
Use call-with-target-database when dumping schema annotations
Munyoki Kilyungi
2023-07-21
Conditionally autogenerate schema triples during dump
Munyoki Kilyungi
2023-07-21
Rename dump-configuration slots
Munyoki Kilyungi
2023-07-21
Make dumping optional, defaulting to #t
Munyoki Kilyungi
2023-07-21
Add table-dump? option to dump-configuration record
Munyoki Kilyungi
2023-07-21
Optionally self-document while dumping
Munyoki Kilyungi
2023-07-21
Add a configuration record-type for for the define macro
Munyoki Kilyungi
2023-07-18
Ignore emacs temporary backup files
Frederick Muriuki Muriithi
2023-06-28
Updated species.ttl
Pjotr Prins
2023-06-28
Add species mapping to wikidata to schema
Pjotr Prins
2023-06-26
Add "-m manifest.scm" flag to guix shell commands
Munyoki Kilyungi
2023-06-24
Fix documentation errors that were leading to confusion
Frederick Muriuki Muriithi
2023-06-24
Add some missing dependencies
Frederick Muriuki Muriithi
2023-06-21
Fix failing tests
Munyoki Kilyungi
2023-06-19
Chunk probeset dump
Munyoki Kilyungi
2023-06-15
Change the transaction log mode to 'autocommit' when deleting graph
Munyoki Kilyungi
2023-06-12
Add a dataset's full name when dumping
Munyoki Kilyungi
2023-06-12
Use PublishFreeze Name as a fallback for InfoPageName
Munyoki Kilyungi
2023-06-12
Annotate a phenotype dataset with 'dataset:
Munyoki Kilyungi
2023-06-12
Replace "Unknown" in Publication fields with an empty string
Munyoki Kilyungi
2023-06-12
Annotate publications without a pmid with "unpublished"
Munyoki Kilyungi
2023-06-12
Use "publication:" as an identifier for publications
Munyoki Kilyungi
2023-06-12
Remove check for confidentiality/publicity during dataset dump
Munyoki Kilyungi
2023-06-12
Add geoPlatfrom to dataset dump
Munyoki Kilyungi
2023-06-12
Add missing Species join when dumping datasets
Munyoki Kilyungi
2023-06-12
Use the correct title for the a dataset
Munyoki Kilyungi
2023-06-12
Rename AboutProcessing alias to AboutDataProcessing
Munyoki Kilyungi
2023-06-12
Replace citations to source from Datasets instead of InfoFiles
Munyoki Kilyungi
2023-06-12
Rename sql-alias of GN notes during dataset dump
Munyoki Kilyungi
2023-06-12
Add rdf defs for datasetOfSpecies
Munyoki Kilyungi
2023-06-12
Add publicationTitle to dataset dump
Munyoki Kilyungi
2023-06-12
Make geoSeries a link during dataset dump
Munyoki Kilyungi
2023-06-12
Minor identation fix
Munyoki Kilyungi
2023-06-12
Add organization to dataset dump
Munyoki Kilyungi
2023-06-12
Use NCBI taxonomy browser instead of uniprot
Munyoki Kilyungi
2023-06-12
Cast longtext fields to fix broket utf-8 characters
Munyoki Kilyungi
2023-06-12
Remove dead comments
Munyoki Kilyungi
2023-06-12
Remove "^[Nn]one$" from some fields from the InfoFiles table
Munyoki Kilyungi
2023-06-12
Default to InfoFiles with the Dataset being a fallback for citations
Munyoki Kilyungi
2023-06-12
Make ((g/ph)enotype/probeset)Dataset subset of Dataset
Munyoki Kilyungi
2023-05-30
Dump OMIM as a normal string without any annotation
Munyoki Kilyungi
2023-05-30
Fix broken utf-8 strings in abstract field
Munyoki Kilyungi
2023-05-30
Add probeset as an extra prefix
Munyoki Kilyungi
2023-05-30
Delete unused prefixes
Munyoki Kilyungi
2023-05-30
Replace species with inbredSet metadata when dumping info-files
Munyoki Kilyungi
2023-05-30
Only dump public data
Munyoki Kilyungi
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