genenetwork3 - GeneNetwork3 REST API for data science and machine learning

Age	Commit message (Expand)	Author
2023-10-27	Ignore construct result for mypy compliance	Munyoki Kilyungi
2023-10-27	Abstract out (sparql) CONSTRUCT into a function.	Munyoki Kilyungi
2023-10-27	Delete gn3.db.rdf.sparql_query.	Munyoki Kilyungi
2023-10-27	Delete db.rdf.get_url_local_name.	Munyoki Kilyungi
2023-10-27	Implement "GET /metadata/phenotypes/:name".	Munyoki Kilyungi
2023-10-27	Delete get_dataset_metadata.	Munyoki Kilyungi
2023-10-27	Implement "GET /metadata/publications/:name".	Munyoki Kilyungi
2023-10-27	Add fabio: and prism: to PREFIXES.	Munyoki Kilyungi
2023-10-27	Implement "GET /metadata/datasets/:name".	Munyoki Kilyungi
2023-10-27	Add missing dcat: prefix.	Munyoki Kilyungi
2023-10-27	Derive RDF_PREFIXES string from PREFIXES.	Munyoki Kilyungi
2023-10-27	Remove get_url_local_name when processing result keys.	Munyoki Kilyungi
2023-10-27	Simplify CONSTRUCT query when fetching a dataset's metadata.	Munyoki Kilyungi
2023-10-27	Update RDF prefixes.	Munyoki Kilyungi
2023-10-06	Make argument mandatory	Frederick Muriuki Muriithi
2023-09-21	Fix query in update_cross_reference	zsloan
2023-09-05	Delete un-used import	Munyoki Kilyungi
2023-09-05	Fix C3001: Lambda expression assigned to a variable	Munyoki Kilyungi
2023-09-05	Remove un-necessary string concatenation	Munyoki Kilyungi
2023-09-05	Replace "escape_string" with safe-query parameters	Munyoki Kilyungi
2023-09-05	Remove type annotations for "none_case_attrs" variables	Munyoki Kilyungi
2023-08-24	Change get_pheno_csv_sample_data to use group ID instead of phenotype ID	zsloan
2023-08-17	Fix query for fetching DataId when inserting ProbeSet data	zsloan
2023-08-17	Fix a couple remaining issues with function parameters	zsloan
2023-08-17	Combine pheno/mrna update functions + some other fixes	zsloan
2023-08-17	Fix queries for fetching group names	zsloan
2023-08-17	Fix fetch_trait query for phenotypes	zsloan
2023-08-17	Fix a few misnamed tables in mrna delete/insert functions	zsloan
2023-08-17	Implement ProbeSet sample data editing	zsloan
2023-08-17	Fix probeset sample data and CSV sample data functions	zsloan
2023-08-17	Fix query for retrieving mrna dataset group name	zsloan
2023-08-17	Fix get_mrna_sample_data query	zsloan
2023-08-17	Fix mrna group name query	zsloan
2023-08-17	Remove Id select from probeset metadata query, since it's included in cols	zsloan
2023-08-17	Add function for retrieving mRNA Assay group name	zsloan
2023-08-17	Make several sample_data fetching functions specific to phenotype or mrna ass...	zsloan
2023-08-04	Remove the ORM-dependent `update` function.	Frederick Muriuki Muriithi
2023-08-02	Add deprecation notice to ORM-dependent `update` function	Frederick Muriuki Muriithi
2023-08-02	Remove ORM-dependent `insert` function	Frederick Muriuki Muriithi
2023-08-02	Remove ORM-dependent `fetchall` and `fetchone` functions	Frederick Muriuki Muriithi
2023-07-26	Fix variable name.	Frederick Muriuki Muriithi
2023-07-26	Remove debug statement.	Frederick Muriuki Muriithi
2023-07-26	Fetch `metadata_audit` trail with direct query functions.	Frederick Muriuki Muriithi
2023-07-26	Function to create a metadata audit trail.	Frederick Muriuki Muriithi
2023-07-21	Update a Publication in the database.	Frederick Muriuki Muriithi
2023-07-21	Fetch a publication by its PubMed ID	Frederick Muriuki Muriithi
2023-07-21	Rename function: fetch_publication ==> fetch_publication_by_id	Frederick Muriuki Muriithi
2023-07-19	Extract code dealing with ProbeSets to their own module.	Frederick Muriuki Muriithi
2023-07-19	Extract reusable code to separate module	Frederick Muriuki Muriithi
2023-07-18	Bug: Change from `_id` to `id_` to avoid downstream breakage.	Frederick Muriuki Muriithi