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author | zsloan | 2023-08-07 20:23:25 +0000 |
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committer | zsloan | 2023-08-17 14:54:42 -0500 |
commit | d0d996f4d963de9e033b622a1e51385cb1be0886 (patch) | |
tree | f8f75f137154a21a6ae54ac13d4bd457ae2de42d /gn3/db | |
parent | 02fdf658e1118e5638663d3a8d87ba3a1e6ef913 (diff) | |
download | genenetwork3-d0d996f4d963de9e033b622a1e51385cb1be0886.tar.gz |
Fix query for retrieving mrna dataset group name
Diffstat (limited to 'gn3/db')
-rw-r--r-- | gn3/db/datasets.py | 10 |
1 files changed, 5 insertions, 5 deletions
diff --git a/gn3/db/datasets.py b/gn3/db/datasets.py index 38819db..0c0fab4 100644 --- a/gn3/db/datasets.py +++ b/gn3/db/datasets.py @@ -44,11 +44,11 @@ def retrieve_mrna_group_name(connection: Any, probeset_id: int): of the group the dataset belongs to. """ query = ( - "SELECT is.Name " - "FROM ProbeSet ps LEFT JOIN ProbeSetXRef psx ON px.ProbeSetId = ps.Id " - "INNER JOIN ProbeSetFreeze psf ON psx.ProbeSetFreezeId = psf.Id " - "INNER JOIN ProbeFreeze pf ON psf.ProbeFreezeId = ProbeFreeze.Id " - "INNER JOIN InbredSet is ON pf.InbredSetId = is.Id " + "SELECT iset.Name " + "FROM ProbeSet ps LEFT JOIN ProbeSetXRef psx ON psx.ProbeSetId = ps.Id " + "LEFT JOIN ProbeSetFreeze psf ON psx.ProbeSetFreezeId = psf.Id " + "LEFT JOIN ProbeFreeze pf ON psf.ProbeFreezeId = pf.Id " + "LEFT JOIN InbredSet iset ON pf.InbredSetId = iset.Id " "WHERE ps.Id = %(probeset_id)s") with connection.cursor() as cursor: cursor.execute(query, {"probeset_id": probeset_id}) |