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PanGEMMA: Genome-wide Efficient Mixed Model Association
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Author
2018-09-15
Using Guix container to build with gcc and clang
Pjotr Prins
2018-09-07
Matrices positive definite issues
Pjotr Prins
2018-09-06
More debugging and a performance check
Pjotr Prins
2018-09-06
More debugging info and raise SIGINT instead of exit
Pjotr Prins
2018-09-06
Further debugging
Pjotr Prins
2018-08-30
Debugging calcPab
Pjotr Prins
2018-08-25
Added a test for LM
Pjotr Prins
2018-07-27
Add floating point hardware checking for Intel on GNU compilers
Pjotr Prins
2018-07-26
Unittest: added test for forcing and catching floating point errors (this works)
Pjotr Prins
2018-07-14
- Guix Makefile added RPATH
Pjotr Prins
2017-11-22
Remove compiler warnings and add check is_nan
Pjotr Prins
2017-11-11
Disable some tests for bslmm which fail with different BLAS versions.
Pjotr Prins
2017-11-11
Cleaning up buffer use thanks to compiler warnings
Pjotr Prins
2017-11-10
Tests: quotes
Pjotr Prins
2017-11-10
Fix test
Pjotr Prins
2017-11-10
Tests: added more bslmm tests
Pjotr Prins
2017-11-09
Adding tests for bslmm
Pjotr Prins
2017-11-09
Tests: add -lm test
Pjotr Prins
2017-11-09
Tests: added bslmm test
Pjotr Prins
2017-10-23
Travis-ci:
Pjotr Prins
2017-10-13
Refactored debug settings
Pjotr Prins
2017-10-13
Replacing first dgemm - tests fail
Pjotr Prins
2017-10-13
OpenBlas: preparing for dgemm use
Pjotr Prins
2017-10-13
Fix header for not showing se
Pjotr Prins
2017-10-13
Consolidate into ProgressBar into one function and related updates
Pjotr Prins
2017-10-05
LMM: skip beta (again) with LRT
Pjotr Prins
2017-10-05
Addresses
Pjotr Prins
2017-10-05
Adding debug statements on entering functions and added test for issue 58
Pjotr Prins
2017-08-26
Debug: only output check on -debug
Pjotr Prins
2017-08-26
Tests and enforces added related to https://github.com/genetics-statistics/GE...
Pjotr Prins
2017-08-22
Fixes matrix checks - looking saner now
Pjotr Prins
2017-08-20
Move shunit2 into ./contrib and add catch-1.8.7
Pjotr Prins
2017-08-20
Unit tests
Pjotr Prins
2017-08-14
Issue 58, add tests for GSLv2 NaN's showing up with covariates
Pjotr Prins
2017-08-14
Tests and fixes https://github.com/genetics-statistics/GEMMA/issues/26
Pjotr Prins
2017-08-13
Fixes https://github.com/genetics-statistics/GEMMA/issues/64
Pjotr Prins
2017-08-03
LOCO is implemented in GEMMA for the BIMBAM format. Pass in the -loco
Pjotr Prins
2017-08-02
Reformatted gemma calls in test_suite.sh.
Peter Carbonetto
2017-07-26
test_suite: run shunit2 from system when available
Pjotr Prins
2017-07-26
test_suite: replace awk with perl to compute file contents and default to shu...
Pjotr Prins
2017-07-26
Added a line count test for K
Pjotr Prins
2017-07-26
github: fix links to gemma repo
Pjotr Prins
2017-07-18
Moved shunit2 files to test directory.
Peter Carbonetto
2017-07-18
Fixed failing test. New test report summary:
Peter Carbonetto
2017-07-16
sunit2: added instructions
Pjotr Prins
2017-07-09
Makefile: force unit tests to throw a make error on less than 100% success
Pjotr Prins
2017-07-09
Tests: more tests
Pjotr Prins
2017-07-09
Tests: added test for univariate and multivariate LMM
Pjotr Prins
2017-07-09
Test: check result
Pjotr Prins
2017-07-09
Add test framework based on shunit2
Pjotr Prins