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| author | Pjotr Prins | 2017-10-06 11:51:18 +0000 |
|---|---|---|
| committer | Pjotr Prins | 2017-10-13 15:27:24 +0000 |
| commit | 63b6796a16ed2c82bb8b08eb4685bf8d56a9d360 (patch) | |
| tree | be1659d5f3770364d6a0773d9913e25f13d74485 /test | |
| parent | ec8a139cb07b46bd0b9e5de2ea8db1f7f335a56c (diff) | |
| download | pangemma-63b6796a16ed2c82bb8b08eb4685bf8d56a9d360.tar.gz | |
Consolidate into ProgressBar into one function and related updates
Diffstat (limited to 'test')
| -rwxr-xr-x | test/test_suite.sh | 6 |
1 files changed, 3 insertions, 3 deletions
diff --git a/test/test_suite.sh b/test/test_suite.sh index 350fc27..dc6053a 100755 --- a/test/test_suite.sh +++ b/test/test_suite.sh @@ -62,7 +62,7 @@ testUnivariateLinearMixedModel() { assertEquals "4038540440.86" `perl -nle 'foreach $x (split(/\s+/,$_)) { $sum += sprintf("%.2f",(substr($x,,0,6))) } END { printf "%.2f",$sum }' $outfn` } -testMultivariateLinearMixedModel() { +testLinearMixedModelPhenotypes() { $gemma -g ../example/mouse_hs1940.geno.txt.gz \ -p ../example/mouse_hs1940.pheno.txt \ -n 1 6 \ @@ -92,8 +92,8 @@ testPlinkStandardRelatednessMatrixK() { # Test for https://github.com/genetics-statistics/GEMMA/issues/58 # fixed GSLv2 NaN's that appeared with covariates. -testPlinkMultivariateLinearMixedModel() { - testname=testPlinkMultivariateLinearMixedModel +testPlinkLinearMixedModelCovariates() { + testname=testPlinkLinearMixedModelCovariates datadir=../example $gemma -bfile $datadir/HLC \ -k output/testPlinkStandardRelatednessMatrixK.sXX.txt \ |