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2018-09-28Atlas compilationPjotr Prins
2018-09-27Using -no-check by default nowPjotr Prins
2018-09-27Inlining GSL callsPjotr Prins
2018-09-26Updated version and added performance statsPjotr Prins
2018-09-19Fix progressbar for K and started on design docPjotr Prins
2018-09-19Replace safeGetline with native versionPjotr Prins
2018-09-18Speedup: kinship computationPjotr Prins
2018-09-18Disable nan checking with no-checkPjotr Prins
2018-09-15Using Guix container to build with gcc and clangPjotr Prins
2018-09-15Remove noisy batch_compute messagePjotr Prins
2018-09-07Matrices positive definite issuesPjotr Prins
2018-09-06Show warning on some unused matricesPjotr Prins
2018-09-06Fix travis errorPjotr Prins
2018-09-06Sometimes a value gets negative zero causing a NaN on the sqrt.Pjotr Prins
Closes #61
2018-09-06More debugging and a performance checkPjotr Prins
2018-09-06More debugging info and raise SIGINT instead of exitPjotr Prins
2018-09-06Further debuggingPjotr Prins
2018-09-01CalcPab notesPjotr Prins
2018-08-31More testingPjotr Prins
2018-08-31Improving readabilityPjotr Prins
2018-08-31Continue debugging calcpabPjotr Prins
2018-08-30Debugging calcPabPjotr Prins
2018-08-26More value checking and bounds checkingPjotr Prins
2018-08-26Make sure tau_inv is initialized outside loop - gets rid of compiler warningPjotr Prins
2018-08-26debug: feenableexcept can be disabled using legacy modePjotr Prins
2018-08-25debug: feenableexcept for MacOS and limit to Intel x64 machinesPjotr Prins
2018-08-25Number format checking in strict mode. Also fixes #149Pjotr Prins
2018-08-25Added remarksPjotr Prins
2018-08-25segfpe handlingPjotr Prins
2018-08-25eigenvalues: some error checking addedPjotr Prins
2018-07-27Add floating point hardware checking for Intel on GNU compilersPjotr Prins
When using the -check function (the default) it is enabled for Kinship computation and LM/LMM up to individual SNP computation. This means there can no longer be NaN values for matrices that are reused for every SNP, but it is possible to have NaN for individual SNPs. Fixes #161
2018-07-26Unittest: added test for forcing and catching floating point errors (this works)Pjotr Prins
2018-07-14Guix: add more build information to the final binaryPjotr Prins
2018-06-29Fix conflictPjotr Prins
2018-06-29Merge branch 'master' of github.com:genetics-statistics/GEMMAPjotr Prins
2018-06-05Typo: sepcified -> specifiedDylan Aïssi
2018-02-28MinGW mkdir function doesn't allow for S_IRWXU, paramsDannyArends
2018-02-28renamed import io.h to gemma_io.hDannyArends
2018-02-28io.h is a std lib function for MinGW64, renamed it to gemma_io.hDannyArends
2018-02-22Changed handling of version number so it does not modify every compilePjotr Prins
2018-01-27Extra error info on strtok parsing failure - should help supportPjotr Prins
2018-01-26Always check input data for strtok - unless -no-check is usedPjotr Prins
2018-01-26Change OpenBLAS warningPjotr Prins
2017-12-19Documentation and Travis fixesPjotr Prins
2017-12-19Make eigelib -legacyPjotr Prins
2017-12-17Reverted on using eigenlib_dgemm because of hanging K compute with datasetPjotr Prins
2017-12-17BimbamKin: show error when genotypes do not matchPjotr Prins
2017-12-12Updated copyright infoPjotr Prins
2017-12-08Changed banner and behaviourPjotr Prins
2017-12-08Legacy mode does not show logl_H1 column in outputPjotr Prins
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