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authorPjotr Prins2017-12-19 13:16:25 +0000
committerPjotr Prins2017-12-19 13:16:25 +0000
commit7064eab1170a422d4ecde84671f5952059341791 (patch)
tree5025d81b897eef3ab6d59c2441245e9befba304c /src
parentc760aa09c2aa91ca6270b5f898c27e9aed376a73 (diff)
downloadpangemma-7064eab1170a422d4ecde84671f5952059341791.tar.gz
Documentation and Travis fixes
Diffstat (limited to 'src')
-rw-r--r--src/gemma.cpp6
1 files changed, 5 insertions, 1 deletions
diff --git a/src/gemma.cpp b/src/gemma.cpp
index e31eaed..edd79d7 100644
--- a/src/gemma.cpp
+++ b/src/gemma.cpp
@@ -543,9 +543,13 @@ void GEMMA::PrintHelp(size_t option) {
cout << " -lmax [num] "
<< " specify maximum value for lambda (default 1e+5)" << endl;
cout
- << " -region [num] "
+ << " -region [num] "
<< " specify the number of regions used to evaluate lambda (default 10)"
<< endl;
+ cout << " -loco [chr] "
+ << " leave one chromosome out (LOCO) by name (requires -a annotation "
+ "file)"
+ << endl;
cout << endl;
}