| Age | Commit message (Expand) | Author |
|---|
| 2024-03-11 | gn: Add python-prefixed....* gn/packages/python.scm (python-prefixed): New variable.
| Arun Isaac |
| 2024-03-11 | gn: Add python-pypubsub....* gn/packages/python.scm (python-pypubsub): New variable.
| Arun Isaac |
| 2024-03-11 | gn: Add python-enlighten....* gn/packages/python.scm (python-enlighten): New variable.
| Arun Isaac |
| 2024-03-11 | gn: Add python-addict....* gn/packages/python.scm (python-addict): New variable.
| Arun Isaac |
| 2024-03-11 | gn: Add python-typing-extensions-4.10....* gn/packages/python.scm (python-typing-extensions-4.10): New
variable.
| Arun Isaac |
| 2024-03-11 | gn: Add python-rdflib-jsonld....python-rdflib-jsonld has been removed from upstream Guix.
* gn/packages/python.scm (python-rdflib-jsonld): New variable.
| Arun Isaac |
| 2023-10-27 | Update dependencies: genenetwork3 and gn-auth...* genenetwork3: Remove `yoyo-migrations` as a dependency
* gn-auth: Use the upstream `yoyo-migrations`
* Remove temporary local definition for yoyo-migrations.
| Frederick Muriuki Muriithi |
| 2023-10-19 | Remove python-arvados-python-client....The package is broken, some of its inputs have been removed from
upstream Guix, and we no longer need this package. Restore it later if
necessary.
* gn/packages/python.scm (python-arvados-python-client): Delete
variable.
| Arun Isaac |
| 2023-09-25 | Delete python-mypy-0.981....* gn/packages/python.scm (python-mypy-0.981): Delete it.
* gn/packages/genenetwork.scm (genenetwork3)[native-inputs]: Replace
python-mypy-0.981 with upstream's python-mypy.
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
| Munyoki Kilyungi |
| 2023-09-05 | gn: python: Add python-mypy-0.981...* gn/packages/python.scm (python-mypy-0.981): New package.
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
| Munyoki Kilyungi |
| 2023-09-05 | gn: python: Add yoyo-migrations-8.2.0...* gn/packages/python.scm: Import (gnu packages databases) and (guix
hg-download).
(yoyo-migrations-8.2.0): New package.
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
| Munyoki Kilyungi |
| 2023-06-14 | gn: genecup: Use correct python-h5py....* gn/packages/python.scm (python-h5py-2): New variable.
* gn/packages/machine-learning.scm (tensorflow-native): Remove comments.
* gn/packages/ratspub.scm (use-corrected-inputs): New procedure.
(genecup-with-tensorflow-native, genecup-latest-with-tensorflow-native):
Use use-corrected-inputs.
| Efraim Flashner |
| 2023-03-22 | python-rdflib-shim: Build with upstream python-rdflib-jsonld....* gn/packages/python.scm (python-rdflib-shim)[source]: Add snippet to
use any version of python-rdflib-jsonld.
[propagated-inputs]: Replace python-rdflib-jsonld-0.6.1 with
python-rdflib-jsonld.
(python-rdflib-jsonld-0.6.1): Remove variable.
| Efraim Flashner |
| 2023-03-22 | Add python-pytest-runner-4....* gn/packages/python.scm (python-pytest-runner-4): New variable.
* gn/packages/bioinformatics.scm (python-pytest-runner-2): MOve to
python.scm
| Efraim Flashner |
| 2023-03-22 | fixup python-pyshexc | Efraim Flashner |
| 2023-03-22 | python-pyshex: Downgrade to 0.7.14....* gn/packages/python.scm (python-pyshex): Downgrade to 0.7.14.
[arguments]: Disable tests. Add phase to fix compatibility with
rdflib-6. Adjust custom 'check phase.
[propagated-inputs]: Remove python-chardet. Replace python-pyshexc with
python-pyshexc-0.7, python-rdflib-shim with python-rdflib,
python-sparqlsluper with python-sparql-slurper.
| Efraim Flashner |
| 2023-03-22 | Add python-py-dateutil....* gn/packages/python.scm (python-py-dateutil): New variable.
| Efraim Flashner |
| 2023-03-22 | Add python-pyshexc-0.7....* gn/packages/python.scm (python-pyshexc-0.7): New variable.
| Efraim Flashner |
| 2023-03-22 | Add python-pytest-5....* gn/packages/python.scm (python-pytest-5): New variable.
| Efraim Flashner |
| 2023-03-20 | python-arvados-python-client: Update to 2.5.0....* gn/packages/python.scm (python-arvados-python-client): Update to 2.5.0.
[source]: Add snippet to not limit the maximum version of pycurl.
[propagated-inputs]: Add python-google-api-core-1, python-google-auth-1,
python-protobuf, python-pyparsing-2.4.7, python-ruamel.yaml. Remove
python38-ruaml.yaml-0.15.76, python-setuptools, python-oauth2client,
python-uritemplate.
(python38-ruaml.yaml-0.15.76): Remove variable.
| Efraim Flashner |
| 2023-03-20 | python-shexjsg: Update to 0.8.2....* gn/packages/python.scm (python-shexjsg): Update to 0.8.2.
[arguments]: Remove custom 'patch-source phase. Update custom 'check
phase.
[propagated-inputs]: Remove python-antlr4-python3-runtime,
python-certifi, python-chardet, python-idna, python-isodate,
python-requests, python-urllib3.
[native-inputs]: Add python-rdflib-shim, python-requests. Remove
python-pyparsing, python-pyshexc, python-rdflib, python-rdflib-jsonld,
python-six, custom test-suite git checkout.
| Efraim Flashner |
| 2023-03-20 | Add python-sparqlslurper....* gn/packages/python.scm (python-sparqlslurper): New variable.
| Efraim Flashner |
| 2023-03-20 | Add python-rdflib-shim....* gn/packages/python.scm (python-rdflib-shim): New variable.
(python-rdflib-jsonld-0.6.1): New variable.
| Efraim Flashner |
| 2023-03-20 | python-pyshex: Update to 0.8.1....* gn/packages/python.scm (python-pyshex): Update to 0.8.1.
[arguments]: Remove custom 'patch-source phase. Update custom 'check
phase.
[propagated-inputs]: Add python-chardet, python-rdflib-shim,
python-sparqlslurper. Remove python-rdflib, python-rdflib-jsonld,
python-pbr, python-sparql-slurper.
[native-inputs]: Add python-pbr, python-unitttest2.
| Efraim Flashner |
| 2023-03-20 | python-pyshexc: Update to 0.9.1....* gn/packages/python.scm (python-pyshexc): Update to 0.9.1.
[arguments]: Update custom 'check phase.
[propagated-inputs]: Add python-chardet, python-rdflib-shim,
python-shexjsg. Remove python-rdflib, python-rdflib-jsonld,
python-requests.
[native-inputs]: Add python-pbr, python-requests. Remove python-shexjsg,
custom test-suite git checkout.
(python-shexjsg-min): Remove variable.
| Efraim Flashner |
| 2023-03-19 | python-pyjsg: Update to 0.11.10....* gn/packages/python.scm (python-pyjsg): Update to 0.11.10.
[arguments]: Remove 'patch-source phase. Skip 1 set of tests in custom
'check phase.
[propagated-inputs]: Move python-requests ...
[native-inputs]: ... to here. Add python-unittest2. Remove test-suite
checkout.
| Efraim Flashner |
| 2023-03-19 | python-antlr4-python3-runtime: Update to 4.9.3....* gn/packages/python.scm (python-antlr4-python3-runtime): Update to
4.9.3.
| Efraim Flashner |
| 2023-03-19 | python-pytest-4: Add missing input....* gn/packages/python.scm (python-pytest-4)[native-inputs]: Add
python-atomicwrites.
| Efraim Flashner |
| 2022-12-04 | gn: Replace IPFS links in python24 and python with GN file server | Pjotr Prins |
| 2022-06-07 | gn: Fix building python2-rpy2. | Efraim Flashner |
| 2022-06-07 | gn: Hide inputs which have been dropped by Guix. | Efraim Flashner |
| 2022-06-07 | gn: Add missing module imports | Efraim Flashner |
| 2022-04-20 | Remove upstreamed packages | Efraim Flashner |
| 2022-04-12 | gn: python-rpy2-next: Remove package....python-rpy2@3.4.5 has been upstreamed.
* gn/packages/python.scm (python-rpy2-next): Delete variable.
* gn/packages/genenetwork.scm (genenetwork2)[propagated-inputs]:
Replace python-rpy2-next with python-rpy2.
Signed-off-by: Arun Isaac <arunisaac@systemreboot.net>
| Alexander |
| 2022-04-04 | gn: packages: python: add python-supervisor...todo:
fix tests: https://github.com/NixOS/nixpkgs/blob/nixos-21.11/pkgs/development/python-modules/supervisor/default.nix#L16
| jgart |
| 2022-03-07 | python-pytest-pudb: enable tests...add more to description field
| jgart |
| 2022-03-03 | gn: Add pytest-pudb...* gn/packages/python.scm: New package.
| BonfaceKilz |
| 2021-12-07 | remove pudb...https://issues.guix.gnu.org/52177
| jgart |
| 2021-12-03 | add pudb | jgart |
| 2021-11-19 | gnu: Add python-requirements-parser....* gn/packages/python.scm (python-requirements-parser): New variable.
| jgart |
| 2021-11-16 | gn: python-sparqlwrapper: Remove package....python-sparqlwrapper has been upstreamed.
* gn/packages/python.scm (python-sparqlwrapper): Delete variable.
| Arun Isaac |
| 2021-11-10 | Remove python-flask-socketio....python-flask-socketio has been upstreamed.
* gn/packages/python.scm (python-flask-socketio): Delete variable.
| Arun Isaac |
| 2021-11-08 | gn: Remove upstreamed packages....* gn/packages/python.scm (python-webcolors): Delete variable.
* gn/packages/messaging.scm: Delete file.
| Arun Isaac |
| 2021-11-04 | gnu: Add python-webcolors....* gn/packages/python.scm (python-webcolors): New variable.
| Arun Isaac |
| 2021-10-27 | gn: python-htmlgen: Download using git-fetch. | Efraim Flashner |
| 2021-08-16 | gn: Add python-flask-debugtoolbar....* gn/packages/python.scm (python-flask-debugtoolbar): New variable.
| BonfaceKilz |
| 2021-06-30 | python gone missing conflict ;) | pjotrp |
| 2021-06-18 | python-rpy2-next: Update to 3.4.5 | BonfaceKilz |
| 2021-05-30 | gn: comment out unpackaged inputs | Efraim Flashner |
| 2021-05-27 | gn: upstream some libraries | Efraim Flashner |
