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rework-species-selection
gn-uploader: Data uploader for GeneNetwork
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Author
2025-04-28
Display logged in user's email.
Frederick Muriuki Muriithi
2025-04-28
View a publication's details.
Frederick Muriuki Muriithi
2025-04-28
Fetch phenotypes linked to a particular publication.
Frederick Muriuki Muriithi
2025-04-28
Fetch a publication by its ID.
Frederick Muriuki Muriithi
2025-04-28
Initialise entry-point for managing publications.
Frederick Muriuki Muriithi
2025-04-28
Fetch *ALL* publications from the database.
Frederick Muriuki Muriithi
2025-04-25
Fix display of upload errors for samples
Frederick Muriuki Muriithi
2025-04-21
Update the previews, in the case where resumables exist.
Frederick Muriuki Muriithi
2025-04-21
Improve check for file existence.
Frederick Muriuki Muriithi
2025-04-21
Associate each preview table with appropriate resumable object.
Frederick Muriuki Muriithi
2025-04-21
Update to bootstrap 5 classes.
Frederick Muriuki Muriithi
2025-04-21
Proceed to jobs status update page.
Frederick Muriuki Muriithi
2025-04-21
Implement rudimentary status update page for background jobs.
Frederick Muriuki Muriithi
2025-04-21
Use module-specific logger.
Frederick Muriuki Muriithi
2025-04-21
Add "DataId" to top-level trait details.
Frederick Muriuki Muriithi
2025-04-14
Fix typo.
Frederick Muriuki Muriithi
2025-04-14
Move common fieldnames into exportable variable.
Frederick Muriuki Muriithi
2025-04-14
Implement difference computations.
Frederick Muriuki Muriithi
2025-04-14
Add tests for new difference computation function.
Frederick Muriuki Muriithi
2025-04-14
Convert PubMed ID to int.
Frederick Muriuki Muriithi
2025-04-14
Update existing linked publication(s) rather than creating new.
Frederick Muriuki Muriithi
2025-04-14
Log out job command for easier debug.
Frederick Muriuki Muriithi
2025-04-14
Provide species, population and dataset identifiers as job metadata.
Frederick Muriuki Muriithi
2025-04-14
Update imports.
Frederick Muriuki Muriithi
2025-04-14
Return created objects with their IDs
Frederick Muriuki Muriithi
2025-04-14
Add types for connection objects.
Frederick Muriuki Muriithi
2025-04-14
Implement computation for publication differences.
Frederick Muriuki Muriithi
2025-04-14
Move code to save new publications to database.
Frederick Muriuki Muriithi
2025-04-11
Fix bug: Provide empty defaults, and fix type.
Frederick Muriuki Muriithi
2025-04-11
Move code to fetch phenotype publications from DB to publications package.
Frederick Muriuki Muriithi
2025-04-11
Move code to fetch publications from pubmed to publications module.
Frederick Muriuki Muriithi
2025-04-11
Write test for computing differences for publications in bulk edits.
Frederick Muriuki Muriithi
2025-04-11
Update application initialisation to allow config updates for tests.
Frederick Muriuki Muriithi
2025-04-09
Use class from Bootstrap5 for hiding elements.
Frederick Muriuki Muriithi
2025-04-05
Don't clear anonymous sessions with every check for login.
Frederick Muriuki Muriithi
2025-04-05
Add base "alert" class for alerts for bootstrap 5.
Frederick Muriuki Muriithi
2025-04-05
Fix fetching of user details.
Frederick Muriuki Muriithi
2025-04-05
Set "logged_in" key together with the token.
Frederick Muriuki Muriithi
2025-04-05
Override only the user details provided rather than the entire object.
Frederick Muriuki Muriithi
2025-03-26
Pass in system log-level to script.
Frederick Muriuki Muriithi
2025-03-26
Provide connection URI for mariadb.
Frederick Muriuki Muriithi
2025-03-26
Update comment text.
Frederick Muriuki Muriithi
2025-03-25
Run job with unbuffered outputs.
Frederick Muriuki Muriithi
2025-03-25
Update name of launcher script used.
Frederick Muriuki Muriithi
2025-03-24
Begin processing the uploadeded bulk-edit file.
Frederick Muriuki Muriithi
2025-03-24
Only allow text/tab-separated-values files to be uploaded.
Frederick Muriuki Muriithi
2025-03-24
Make name same a id.
Frederick Muriuki Muriithi
2025-03-24
Initialise jobs package for flask.
Frederick Muriuki Muriithi
2025-03-21
Add "PubMed_ID" field
Frederick Muriuki Muriithi
2025-03-21
Bulk Edit: Initialise the bulk-edit upload
Frederick Muriuki Muriithi
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