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gn-uploader: Data uploader for GeneNetwork
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2025-06-03
Memory saving: Don't reload saved data
Frederick Muriuki Muriithi
2025-06-02
Compute data in files lazily.
Frederick Muriuki Muriithi
2025-06-02
Process NA-strings in the worker script.
Frederick Muriuki Muriithi
2025-06-02
Add note in documentation.
Frederick Muriuki Muriithi
2025-06-02
Revert "Convert N/A values to NoneType objects."
Frederick Muriuki Muriithi
2025-06-02
Update placeholder function
Frederick Muriuki Muriithi
2025-06-02
Add missing import.
Frederick Muriuki Muriithi
2025-06-02
Fix bug: Compute data correctly. Replace N/A strings with NoneType.
Frederick Muriuki Muriithi
2025-06-02
Add some debugging statements.
Frederick Muriuki Muriithi
2025-06-02
Parametrize the "DataId" column for different tables.
Frederick Muriuki Muriithi
2025-06-02
Explicitly query for newly entered data.
Frederick Muriuki Muriithi
2025-06-02
Convert N/A values to NoneType objects.
Frederick Muriuki Muriithi
2025-06-02
Pass the phenotypes name-to-id map to functions.
Frederick Muriuki Muriithi
2025-06-02
Compute the map from a phenotype's name to its ID.
Frederick Muriuki Muriithi
2025-05-30
Refactor: Extract common pattern into separate function
Frederick Muriuki Muriithi
2025-05-30
Add typing to load_data function and invoke it.
Frederick Muriuki Muriithi
2025-05-30
Save standard errors and counts.
Frederick Muriuki Muriithi
2025-05-30
Get the species, population and dataset.
Frederick Muriuki Muriithi
2025-05-30
Add more tables to lock list.
Frederick Muriuki Muriithi
2025-05-30
Fix query: Add missing field and parameter.
Frederick Muriuki Muriithi
2025-05-30
Fix function names.
Frederick Muriuki Muriithi
2025-05-30
Fix processing of numerical data to save to the database.
Frederick Muriuki Muriithi
2025-05-30
Fix file paths: append the path to the extraction directory.
Frederick Muriuki Muriithi
2025-05-30
Add new file type.
Frederick Muriuki Muriithi
2025-05-30
Add dataset_id and bundle path to job metadata.
Frederick Muriuki Muriithi
2025-05-30
Fix typo: Fix table name.
Frederick Muriuki Muriithi
2025-05-30
Bug: Loop until the data is exhausted.
Frederick Muriuki Muriithi
2025-05-30
Fix typo, and bug.
Frederick Muriuki Muriithi
2025-05-30
Fix indentation.
Frederick Muriuki Muriithi
2025-05-30
Refactor out common `__row_to_dataitems__` function.
Frederick Muriuki Muriithi
2025-05-30
Use full table names rather than aliases
Frederick Muriuki Muriithi
2025-05-28
Bug: Fix actual data value, not result set.
Frederick Muriuki Muriithi
2025-05-28
Bug: Add missing commas.
Frederick Muriuki Muriithi
2025-05-28
Maintain single list of tables — build logs and query from list
Frederick Muriuki Muriithi
2025-05-28
Add missing import.
Frederick Muriuki Muriithi
2025-05-28
Pass path to bundle extraction dir, and make paths relative to it.
Frederick Muriuki Muriithi
2025-05-28
Add javascript debugging function.
Frederick Muriuki Muriithi
2025-05-19
Extract the bundle first.
Frederick Muriuki Muriithi
2025-05-19
Add "Publication" table to locked tables.
Frederick Muriuki Muriithi
2025-05-19
Bug: Connection objects do not have execute() function.
Frederick Muriuki Muriithi
2025-05-19
Handle case where the given publication_id does not exist.
Frederick Muriuki Muriithi
2025-05-19
Fix generic bugs
Frederick Muriuki Muriithi
2025-05-19
Import missing symbols.
Frederick Muriuki Muriithi
2025-05-19
Provide extra metadata to the job.
Frederick Muriuki Muriithi
2025-05-19
Provide missing URI to the MariaDB database to the script.
Frederick Muriuki Muriithi
2025-05-19
Cross-reference phenotypes, publications, and data.
Frederick Muriuki Muriithi
2025-05-19
Retrieve publication first.
Frederick Muriuki Muriithi
2025-05-19
Simplify handling of publications: Assume a maximum of one.
Frederick Muriuki Muriithi
2025-05-19
Add placeholder stub to be implemented later.
Frederick Muriuki Muriithi
2025-05-19
Add some notes for later.
Frederick Muriuki Muriithi
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