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2025-04-14Compute new PubMed IDs.Frederick Muriuki Muriithi
2025-04-14Update imports.Frederick Muriuki Muriithi
2025-04-14Compute differences with tested function.Frederick Muriuki Muriithi
2025-04-14Move code to save new publications to database.Frederick Muriuki Muriithi
2025-04-11Move code to fetch phenotype publications from DB to publications package.Frederick Muriuki Muriithi
2025-04-11Move code to fetch publications from pubmed to publications module.Frederick Muriuki Muriithi
2025-04-09Convert PubMed_ID value from file to intFrederick Muriuki Muriithi
2025-04-09Compute publications differences.Frederick Muriuki Muriithi
2025-04-09Save new publications retrieved from NCBI's PubMed database.Frederick Muriuki Muriithi
2025-04-09Retrieve publication information from NCBI.Frederick Muriuki Muriithi
2025-04-09Fix typo.Frederick Muriuki Muriithi
2025-04-09Check whether there are new PubMed IDs before beginning the fetch.Frederick Muriuki Muriithi
2025-03-26Pass PubMed IDs from the file to difference computation function.Frederick Muriuki Muriithi
2025-03-26Add function to compute publication differences.Frederick Muriuki Muriithi
2025-03-26Partial implementation: Fetch publications from NCBI.Frederick Muriuki Muriithi
2025-03-26Fetch existing publications from the database.Frederick Muriuki Muriithi
2025-03-26Compute differences in the descriptions.Frederick Muriuki Muriithi
2025-03-26Replaces empty strings with NoneFrederick Muriuki Muriithi
2025-03-26Collect IDs once at the top-level call to save on iterations.Frederick Muriuki Muriithi
2025-03-26Check whether the IDs are valid.Frederick Muriuki Muriithi
2025-03-25Add function to read the file and do basic data processing.Frederick Muriuki Muriithi
2025-03-25Initialise background script to handle bulk edits.Frederick Muriuki Muriithi
2025-01-28Remove obsoleted script.Frederick Muriuki Muriithi
2025-01-23Ensure names are lowercase for comparison purposes.Frederick Muriuki Muriithi
2024-12-03Fix some linting and mypy issues.Frederick Muriuki Muriithi
2024-12-03Improve error textFrederick Muriuki Muriithi
2024-12-03Update file metadata using a mappingFrederick Muriuki Muriithi
2024-12-03Provide consistent way to build file-specific fully-qualified keysFrederick Muriuki Muriithi
2024-12-03Save 'pheno' errors in redis as they are found.Frederick Muriuki Muriithi
2024-12-03Add some phenocovar metadata.Frederick Muriuki Muriithi
2024-12-03Save phenocovar errors in redis as they are found.Frederick Muriuki Muriithi
2024-12-03Pass the redis connection and fully qualified job idFrederick Muriuki Muriithi
2024-12-03Wrap everything in try-catch to handle errors gracefully.Frederick Muriuki Muriithi
2024-12-02Fix typo.Frederick Muriuki Muriithi
2024-12-02Send logs to STDOUT too.Frederick Muriuki Muriithi
2024-12-02Return 0 on completion of QC processing.Frederick Muriuki Muriithi
2024-12-02Change from 'pending' to 'started' on entry to script.Frederick Muriuki Muriithi
2024-11-22Use gn-libs code for db connection.Frederick Muriuki Muriithi
2024-10-24Reduce number of local variables created in function.Frederick Muriuki Muriithi
2024-10-24Add `jobid` to extraction directoryFrederick Muriuki Muriithi
2024-10-24Check pheno, phenose, and phenonum files with loggingFrederick Muriuki Muriithi
2024-10-24Check phenocovar files with loggingFrederick Muriuki Muriithi
2024-10-24Fix linting and typing errors.Frederick Muriuki Muriithi
2024-10-24Add a `--loglevel` argument to select loglevel in scriptsFrederick Muriuki Muriithi
2024-10-24Parse entire namespace object rather than individual values.Frederick Muriuki Muriithi
2024-10-24Move logger creation to `build_main` functionFrederick Muriuki Muriithi
2024-10-24Add handler to send log messages to specific Redis listFrederick Muriuki Muriithi
2024-10-22Refactor `qc_pheno_file` and reuse it for different file types.Frederick Muriuki Muriithi
2024-10-22Check for errors in `pheno` files.Frederick Muriuki Muriithi
2024-10-21Check `phenocovar` files for errors.Frederick Muriuki Muriithi
generated by cgit-pink 1.4.1 (git 2.36.1) at 2025-12-24 21:31:01 +0000