Age | Commit message (Expand) | Author |
2024-03-19 | Query by `Id` rather than `ProbeFreezeId`...Previously `ProbeFreezeId` was set as 1 more than the largest `Id`
value found, which might not end up being the same as the incremented
Id.
This commit, thus, queries by `Id` which is more robust, and does an
actual update for the `ProbeFreezeId` column to make it same value as
`Id`.
| Frederick Muriuki Muriithi |
2024-01-24 | Checks: Update code and tests to ensure all checks pass. | Frederick Muriuki Muriithi |
2024-01-24 | redis-prefix: Update "insert data" path. | Frederick Muriuki Muriithi |
2024-01-08 | Use extracted functions and fix bugs | Frederick Muriuki Muriithi |
2024-01-08 | Extract common database functions into a separate package. | Frederick Muriuki Muriithi |
2023-12-14 | Pass connection to `species_by_id` function....To make `species_by_id` function reusable even outside of the
application context, pass in the database connection instead of
creating the connection inside the function.
| Frederick Muriuki Muriithi |
2023-11-30 | Handle duplicate dataset creation error...Notify the user when they try to create a new dataset that has the
same name as an existing dataset and give them the chance to fix it
before continuing.
| Frederick Muriuki Muriithi |
2023-11-15 | Provide default `AuthorisedUsers` value. | Frederick Muriuki Muriithi |
2023-10-18 | Explicitly specify columns...Due to possible schema differences between local small db on
development computer and those on CI/CD and Production, explicitly
specify the columns being operated on by the queries.
| Frederick Muriuki Muriithi |
2023-10-16 | Indicate progress for data insert. | Frederick Muriuki Muriithi |
2023-10-16 | Link study to ProbeSetFreeze table. | Frederick Muriuki Muriithi |
2022-08-05 | Update job status. Display stdout and stderr outputs...* Display the status of the job, as it is running
* Display STDERR output if an error occurs
* Display STDOUT output as job is running and on successful completion
of the job
| Frederick Muriuki Muriithi |
2022-08-04 | Implement data insertion...- Hook up external data insertion script to webserver code
- Provide rudimentary status indication
- Generalise some job creation details
| Frederick Muriuki Muriithi |
2022-08-04 | Fix typo: 'species' -> 'speciesid' | Frederick Muriuki Muriithi |
2022-07-19 | Implement confirmation stage...Provide user with a confirmation stage where they can verify all the
data before inserting into the database.
| Frederick Muriuki Muriithi |
2022-07-19 | Enable creation of new dataset...Enable the user to create a new dataset should the need arise.
A few extra fixes were done, such as:
- Provide list of average methods to choose from
- Provide input elements for some expected fields
- Add a new confirmation step before doing the actual data update
| Frederick Muriuki Muriithi |
2022-07-19 | Replace redirect with user confirmation...Rather than using the redirect, that led to exposing the study id as a
get parameter, this commit adds an auxilliary step that allows the
user to choose whether to continue with the new study or go back and
select an existing study.
| Frederick Muriuki Muriithi |
2022-07-19 | Implement dataset selection...- Implement UI enabling selection from existing datasets
- Start implementation of UI that enables creation of new dataset
| Frederick Muriuki Muriithi |
2022-07-19 | Implement study creation...Enable the creation of the new study, and redirect appropriately with
the new study id.
| Frederick Muriuki Muriithi |
2022-07-19 | Add 'group' and 'tissue' selection....- Build code to populate the "Group" and "Tissue" dropdown lists
- Enable redirect with POST data (code 307) in case there is input
error to enable the user fix their errors
- Move hidden fields to macro to reduce repetition
| Frederick Muriuki Muriithi |
2022-07-19 | Implement select study...Implement the select study UI
| Frederick Muriuki Muriithi |
2022-07-19 | Select the platform (GeneChipId) first | Frederick Muriuki Muriithi |
2022-07-07 | Fix linting and typing errors | Frederick Muriuki Muriithi |
2022-07-07 | Add filetype details to database update code...The filetype determines the queries to be run to update the database,
therefore, this commit adds filetype information.
| Frederick Muriuki Muriithi |
2022-07-07 | Provide selection for GeneChips...The GeneChipId value is required for the data being inserted, so this
commit provides the UI to enable selection of the chip.
| Frederick Muriuki Muriithi |
2022-07-06 | Implement UI for dataset selection...As part of updating the database with the new data, there is a need to
select the appropriate dataset that the data belongs to, and this
commit provides the UI to assist the user do that.
| Frederick Muriuki Muriithi |