| Age | Commit message (Collapse) | Author | |
|---|---|---|---|
| 7 days | Fetch *ALL* publications from the database. | Frederick Muriuki Muriithi | |
| 10 days | Fix display of upload errors for samples | Frederick Muriuki Muriithi | |
| * Update the uri to fit in with existing paradigm * Pass the species and population to the endpoint | |||
| 10 days | Handle exceptions explicitly | Frederick Muriuki Muriithi | |
| Handle any thrown exceptions explicitly to prevent the `with` statement from swallowing them, leading to silent failure of the script. | |||
| 14 days | Update the previews, in the case where resumables exist. | Frederick Muriuki Muriithi | |
| 14 days | Improve check for file existence. | Frederick Muriuki Muriithi | |
| 14 days | Associate each preview table with appropriate resumable object. | Frederick Muriuki Muriithi | |
| 14 days | Update to bootstrap 5 classes. | Frederick Muriuki Muriithi | |
| 14 days | Proceed to jobs status update page. | Frederick Muriuki Muriithi | |
| 14 days | Implement rudimentary status update page for background jobs. | Frederick Muriuki Muriithi | |
| 2025-04-21 | Use module-specific logger. | Frederick Muriuki Muriithi | |
| 2025-04-21 | Add "DataId" to top-level trait details. | Frederick Muriuki Muriithi | |
| The `DataId` is unique in the `PublishXRef` table. | |||
| 2025-04-14 | Setup module-level loggers. | Frederick Muriuki Muriithi | |
| 2025-04-14 | Compute data differences in the script. | Frederick Muriuki Muriithi | |
| 2025-04-14 | Convert values to float where present. | Frederick Muriuki Muriithi | |
| 2025-04-14 | Fix typo. | Frederick Muriuki Muriithi | |
| 2025-04-14 | Move common fieldnames into exportable variable. | Frederick Muriuki Muriithi | |
| 2025-04-14 | Implement difference computations. | Frederick Muriuki Muriithi | |
| 2025-04-14 | Add tests for new difference computation function. | Frederick Muriuki Muriithi | |
| 2025-04-14 | Convert PubMed ID to int. | Frederick Muriuki Muriithi | |
| 2025-04-14 | Move test to appropriate package. | Frederick Muriuki Muriithi | |
| 2025-04-14 | Move difference computation to `run()` function. | Frederick Muriuki Muriithi | |
| 2025-04-14 | Update existing linked publication(s) rather than creating new. | Frederick Muriuki Muriithi | |
| 2025-04-14 | Log out job command for easier debug. | Frederick Muriuki Muriithi | |
| 2025-04-14 | Provide species, population and dataset identifiers as job metadata. | Frederick Muriuki Muriithi | |
| 2025-04-14 | Compute new PubMed IDs. | Frederick Muriuki Muriithi | |
| 2025-04-14 | Update imports. | Frederick Muriuki Muriithi | |
| 2025-04-14 | Return created objects with their IDs | Frederick Muriuki Muriithi | |
| 2025-04-14 | Add types for connection objects. | Frederick Muriuki Muriithi | |
| 2025-04-14 | Compute differences with tested function. | Frederick Muriuki Muriithi | |
| 2025-04-14 | Implement computation for publication differences. | Frederick Muriuki Muriithi | |
| 2025-04-14 | Move code to save new publications to database. | Frederick Muriuki Muriithi | |
| 2025-04-14 | Rename test module. | Frederick Muriuki Muriithi | |
| 2025-04-11 | Fix bug: Provide empty defaults, and fix type. | Frederick Muriuki Muriithi | |
| 2025-04-11 | Move code to fetch phenotype publications from DB to publications package. | Frederick Muriuki Muriithi | |
| 2025-04-11 | Move code to fetch publications from pubmed to publications module. | Frederick Muriuki Muriithi | |
| 2025-04-11 | Write test for computing differences for publications in bulk edits. | Frederick Muriuki Muriithi | |
| 2025-04-11 | Setup client for use with tests. | Frederick Muriuki Muriithi | |
| 2025-04-11 | Update application initialisation to allow config updates for tests. | Frederick Muriuki Muriithi | |
| 2025-04-09 | Convert PubMed_ID value from file to int | Frederick Muriuki Muriithi | |
| 2025-04-09 | Compute publications differences. | Frederick Muriuki Muriithi | |
| 2025-04-09 | Save new publications retrieved from NCBI's PubMed database. | Frederick Muriuki Muriithi | |
| 2025-04-09 | Retrieve publication information from NCBI. | Frederick Muriuki Muriithi | |
| 2025-04-09 | Use class from Bootstrap5 for hiding elements. | Frederick Muriuki Muriithi | |
| 2025-04-09 | Fix typo. | Frederick Muriuki Muriithi | |
| 2025-04-09 | Check whether there are new PubMed IDs before beginning the fetch. | Frederick Muriuki Muriithi | |
| 2025-04-05 | Don't clear anonymous sessions with every check for login. | Frederick Muriuki Muriithi | |
| 2025-04-05 | Add base "alert" class for alerts for bootstrap 5. | Frederick Muriuki Muriithi | |
| 2025-04-05 | Fix fetching of user details. | Frederick Muriuki Muriithi | |
| Move the fetching of user details to the client module. Add checks to only fetch the details if they are not updated yet. | |||
| 2025-04-05 | Set "logged_in" key together with the token. | Frederick Muriuki Muriithi | |
| 2025-04-05 | Override only the user details provided rather than the entire object. | Frederick Muriuki Muriithi | |
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index : gn-uploader | |
| gn-uploader: Data uploader for GeneNetwork |
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