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gn-uploader: Data uploader for GeneNetwork
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Author
32 hours
Implement basic UI for "Add Genotypes Records" feature.
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Frederick Muriuki Muriithi
33 hours
Copy common JS code from 'add-phenotypes-raw-files.html' template.
Frederick Muriuki Muriithi
33 hours
Init "Add Genotypes Records" endpoint.
Frederick Muriuki Muriithi
35 hours
Check for zero records before attempting operations.
Frederick Muriuki Muriithi
35 hours
Use Python's logging rather than the app logger.
Frederick Muriuki Muriithi
5 days
Include centiMorgans.
Frederick Muriuki Muriithi
5 days
Enable use of DataTables for UI.
Frederick Muriuki Muriithi
5 days
Add links to CI/CD badges
Frederick Muriuki Muriithi
5 days
Bugfix: Update links and argument after previous commits.
Frederick Muriuki Muriithi
5 days
UI styling: Prevent elements from extending viewport horizontally.
Frederick Muriuki Muriithi
5 days
Improve UI text.
Frederick Muriuki Muriithi
5 days
PoC: UI for genotype records.
Frederick Muriuki Muriithi
5 days
Fetch genotype records.
Frederick Muriuki Muriithi
7 days
Improve page copy.
Frederick Muriuki Muriithi
11 days
Fetch genetic markers by both species and population.
Frederick Muriuki Muriithi
11 days
Ignore an issue caught by pylint.
Frederick Muriuki Muriithi
11 days
Remove duplicate decorator -- Use higher-order function.
Frederick Muriuki Muriithi
11 days
Bugfix: Close <div> element and re-indent code.
Frederick Muriuki Muriithi
2026-04-16
Enable search by the publications titles and authors.
Frederick Muriuki Muriithi
2026-04-16
Attach publication details to each phenotype trait.
Frederick Muriuki Muriithi
2026-04-16
Improve error messages.
Frederick Muriuki Muriithi
2026-04-16
Fix bug with cascade of name checks.
Frederick Muriuki Muriithi
2026-04-16
Provide defaults for Year and Month.
Frederick Muriuki Muriithi
2026-04-15
Update to error log, because it's an error, even though we return 0.
Frederick Muriuki Muriithi
2026-04-15
Move tracing details to INFO loglevel rather than debug.
Frederick Muriuki Muriithi
2026-04-15
Pull helper function out of main().
Frederick Muriuki Muriithi
2026-04-13
Pick loggable modules from the application configurations.
Frederick Muriuki Muriithi
2026-04-13
Move "Upload Genotypes" button to dataset page.
Frederick Muriuki Muriithi
2026-04-13
Retrieve ALL markers for a species regardless of data.
Frederick Muriuki Muriithi
2026-04-13
Open page in a new tab.
Frederick Muriuki Muriithi
2026-04-13
Fetch markers from JSON endpoint.
Frederick Muriuki Muriithi
2026-04-13
Rework `list_markers`: return list of markers and basic metadata.
Frederick Muriuki Muriithi
2026-04-13
Add generic "with_dataset" decorator.
Frederick Muriuki Muriithi
2026-04-13
Add module-level logging.
Frederick Muriuki Muriithi
2026-04-13
Get possibly filtered set of markers and count of total records.
Frederick Muriuki Muriithi
2026-04-13
Delete obsolete template.
Frederick Muriuki Muriithi
2026-04-13
Separate related UI elements into separate rows.
Frederick Muriuki Muriithi
2026-04-13
Only parse content when it's present.
Frederick Muriuki Muriithi
2026-04-13
Improve UI text and reorganise the UI.
Frederick Muriuki Muriithi
2026-04-13
Convert from "disabled" to "readonly" to ensure value is submitted.
Frederick Muriuki Muriithi
2026-04-09
Use multiple threads to speed up the computations.
Frederick Muriuki Muriithi
2026-04-09
Specify the --permu_output option to QTLReaper
Frederick Muriuki Muriithi
2026-04-09
pylint: non-assigned expressions - silence linter.
Frederick Muriuki Muriithi
2026-04-09
Add a comment note on phenotype resources.
Frederick Muriuki Muriithi
2026-04-09
Prompt user for a name for the resource object.
Frederick Muriuki Muriithi
2026-04-09
Customise CSS only for specific form.
Frederick Muriuki Muriithi
2026-03-27
Genenetwork: Initialise datatable for genetic markers.
Frederick Muriuki Muriithi
2026-03-27
genotypes: Reorganise UI.
Frederick Muriuki Muriithi
2026-03-27
genotypes: Refactor to consistently use monads.
Frederick Muriuki Muriithi
2026-03-27
genotypes: Move "GET" handling out of context manager.
Frederick Muriuki Muriithi
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