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-rw-r--r--uploader/templates/sui-index.html200
1 files changed, 119 insertions, 81 deletions
diff --git a/uploader/templates/sui-index.html b/uploader/templates/sui-index.html
index 888823f..b93bf40 100644
--- a/uploader/templates/sui-index.html
+++ b/uploader/templates/sui-index.html
@@ -13,16 +13,16 @@
 
 {%macro add_form_buttons()%}
 <div class="row form-buttons">
-      <div class="col">
-        <input type="submit"
-               class="btn btn-primary"
-               value="use selected species" />
-      </div>
-      <div class="col">
-        <a href="{{url_for('species.create_species', return_to='base.index')}}"
-           class="btn btn-outline-primary"
-           title="Create a new species.">Create a new Species</a>
-      </div>
+  <div class="col">
+    <input type="submit"
+           class="btn btn-primary"
+           value="use selected species" />
+  </div>
+  <div class="col">
+    <a href="{{url_for('species.create_species', return_to='base.index')}}"
+       class="btn btn-outline-primary"
+       title="Create a new species.">Create a new Species</a>
+  </div>
 </div>
 {%endmacro%}
 
@@ -31,93 +31,131 @@
 {%if user_logged_in()%}
 
 <div class="row">
-  <div class="row">
-    <h2 class="heading">Species</h2>
-
-    <p>Select the species you want to work with.</p>
-  </div>
+  <ul class="nav nav-tabs" id="index-actions">
+    <li class="nav-item presentation">
+      <button class="nav-link active"
+              id="upload-data-tab"
+              data-bs-toggle="tab"
+              data-bs-target="#upload-data-content"
+              type="button"
+              role="tab"
+              aria-controls="upload-data-content"
+              aria-selected="false">Upload Data</button></li>
+    <li class="nav-item presentation">
+      <button class="nav-link"
+              id="publications-tab"
+              data-bs-toggle="tab"
+              data-bs-target="#publications-content"
+              type="button"
+              role="tab"
+              aria-controls="publications-content"
+              aria-selected="true">Publications</button></li>
+  </ul>
 </div>
 
 <div class="row">
-  <form method="GET" action="{{url_for('base.index')}}" class="form-horizontal">
-    {{add_http_feature_flags()}}
-
-    {{add_form_buttons()}}
-
-    {%if species | length != 0%}
-    <div style="margin-top:1em;">
-      <table id="tbl-select-species" class="table compact stripe"
-             data-species-list='{{species | tojson}}'>
-        <thead>
-          <tr>
-            <th></th>
-            <th>Species Name</th>
-          </tr>
-        </thead>
-
-        <tbody></tbody>
-      </table>
-    </div>
+  <div class="tab-content" id="upload-data-tabs-content">
+    <div class="tab-pane fade show active"
+         id="upload-data-content"
+         role="tabpanel"
+         aria-labelledby="upload-data-content-tab">
+      <h2 class="heading">Species</h2>
 
-    {%else%}
+      <p>Select the species you want to work with.</p>
 
-    <label class="control-label" for="rdo-cant-find-species">
-      <input id="rdo-cant-find-species" type="radio" name="species_id"
-             value="CREATE-SPECIES" />
-      There are no species to select from. Create the first one.</label>
+      <form method="GET" action="{{url_for('base.index')}}" class="form-horizontal">
+        {{add_http_feature_flags()}}
 
-    <div class="col-sm-offset-10 col-sm-2">
-      <input type="submit"
-             class="btn btn-primary col-sm-offset-1"
-             value="continue" />
-    </div>
+        {{add_form_buttons()}}
 
-    {%endif%}
+        {%if species | length != 0%}
+        <div style="margin-top:1em;">
+          <table id="tbl-select-species" class="table compact stripe"
+                 data-species-list='{{species | tojson}}'>
+            <thead>
+              <tr>
+                <th></th>
+                <th>Species Name</th>
+              </tr>
+            </thead>
 
-    {{add_form_buttons()}}
+            <tbody></tbody>
+          </table>
+        </div>
 
-  </form>
-</div>
+        {%else%}
 
-{%else%}
+        <label class="control-label" for="rdo-cant-find-species">
+          <input id="rdo-cant-find-species" type="radio" name="species_id"
+                 value="CREATE-SPECIES" />
+          There are no species to select from. Create the first one.</label>
 
-<div class="row">
-  <p>The Genenetwork Uploader (<em>gn-uploader</em>) enables upload of new data
-    into the Genenetwork System. It provides Quality Control over data, and
-    guidance in case you data does not meet the standards for acceptance.</p>
-  <p>
-    <a href="{{authserver_authorise_uri()}}"
-       title="Sign in to the system"
-       class="btn btn-primary">Sign in</a>
-    to get started.</p>
-</div>
-{%endif%}
+        <div class="col-sm-offset-10 col-sm-2">
+          <input type="submit"
+                 class="btn btn-primary col-sm-offset-1"
+                 value="continue" />
+        </div>
 
-{%endblock%}
+        {%endif%}
 
+        {{add_form_buttons()}}
 
+      </form>
+    </div>
 
-{%block sidebarcontents%}
-<div class="row">
-  <p>The data in Genenetwork is related to one species or another. Use the form
-    provided to select from existing species, or click on the
-    "Create a New Species" button if you cannot find the species you want to
-    work with.</p>
-</div>
-<div class="row">
-  <form id="frm-quick-navigation">
-    <legend>Quick Navigation</legend>
-    <div class="form-group">
-      <label for="fqn-species-id">Species</label>
-      <select name="species_id">
-        <option value="">Select species</option>
-      </select>
+    <div class="tab-pane fade"
+         id="publications-content"
+         role="tabpanel"
+         aria-labelledby="publications-content-tab">
+      <p>View, edit and delete existing publications, and add new
+        publications by clicking on the button below.</p>
+
+      <a href="{{url_for('publications.index')}}"
+         title="Manage publications."
+         class="btn btn-primary">manage publications</a>
     </div>
-  </form>
+  </div>
 </div>
-{%endblock%}
+
+  {%else%}
+
+  <div class="row">
+    <p>The Genenetwork Uploader (<em>gn-uploader</em>) enables upload of new data
+      into the Genenetwork System. It provides Quality Control over data, and
+      guidance in case you data does not meet the standards for acceptance.</p>
+    <p>
+      <a href="{{authserver_authorise_uri()}}"
+         title="Sign in to the system"
+         class="btn btn-primary">Sign in</a>
+      to get started.</p>
+  </div>
+  {%endif%}
+
+  {%endblock%}
+
+
+
+  {%block sidebarcontents%}
+  <div class="row">
+    <p>The data in Genenetwork is related to one species or another. Use the form
+      provided to select from existing species, or click on the
+      "Create a New Species" button if you cannot find the species you want to
+      work with.</p>
+  </div>
+  <div class="row">
+    <form id="frm-quick-navigation">
+      <legend>Quick Navigation</legend>
+      <div class="form-group">
+        <label for="fqn-species-id">Species</label>
+        <select name="species_id">
+          <option value="">Select species</option>
+        </select>
+      </div>
+    </form>
+  </div>
+  {%endblock%}
 
 
-{%block javascript%}
-<script type="text/javascript" src="/static/js/species.js"></script>
-{%endblock%}
+  {%block javascript%}
+  <script type="text/javascript" src="/static/js/species.js"></script>
+  {%endblock%}