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+{%extends "phenotypes/base.html"%}
+{%from "flash_messages.html" import flash_all_messages%}
+{%from "macro-table-pagination.html" import table_pagination%}
+{%from "populations/macro-display-population-card.html" import display_population_card%}
+
+{%block title%}Phenotypes{%endblock%}
+
+{%block pagetitle%}Phenotypes{%endblock%}
+
+{%block lvl4_breadcrumbs%}
+<li {%if activelink=="view-dataset"%}
+ class="breadcrumb-item active"
+ {%else%}
+ class="breadcrumb-item"
+ {%endif%}>
+ <a href="{{url_for('species.populations.phenotypes.view_dataset',
+ species_id=species.SpeciesId,
+ population_id=population.Id,
+ dataset_id=dataset.Id)}}">View</a>
+</li>
+{%endblock%}
+
+{%block contents%}
+{{flash_all_messages()}}
+
+<div class="row">
+ <p>The basic dataset details are:</p>
+
+ <table class="table">
+ <thead>
+ <tr>
+ <th>Name</th>
+ <th>Full Name</th>
+ <th>Short Name</th>
+ </tr>
+ </thead>
+
+ <tbody>
+ <tr>
+ <td>{{dataset.Name}}</td>
+ <td>{{dataset.FullName}}</td>
+ <td>{{dataset.ShortName}}</td>
+ </tr>
+ </tbody>
+ </table>
+</div>
+
+<div class="row">
+ <p><a href="{{url_for('species.populations.phenotypes.add_phenotypes',
+ species_id=species.SpeciesId,
+ population_id=population.Id,
+ dataset_id=dataset.Id)}}"
+ title="Add a bunch of phenotypes"
+ class="btn btn-primary">Add phenotypes</a></p>
+</div>
+
+<div class="row">
+ <h2>Phenotype Data</h2>
+
+ <p>Click on any of the phenotypes in the table below to view and edit that
+ phenotype's data.</p>
+ <p>Use the search to filter through all the phenotypes and find specific
+ phenotypes of interest.</p>
+</div>
+
+
+<div class="row">
+
+ <table id="tbl-phenotypes-list" class="table compact stripe cell-border">
+ <thead>
+ <tr>
+ <th></th>
+ <th>Index</th>
+ <th>Record</th>
+ <th>Description</th>
+ </tr>
+ </thead>
+
+ <tbody></tbody>
+ </table>
+</div>
+{%endblock%}
+
+{%block sidebarcontents%}
+{{display_population_card(species, population)}}
+{%endblock%}
+
+
+{%block javascript%}
+<script type="text/javascript">
+ $(function() {
+ var species_id = {{species.SpeciesId}};
+ var population_id = {{population.Id}};
+ var dataset_id = {{dataset.Id}};
+ var dataset_name = "{{dataset.Name}}";
+ var data = {{phenotypes | tojson}};
+
+ var dtPhenotypesList = buildDataTable(
+ "#tbl-phenotypes-list",
+ data,
+ [
+ {
+ data: function(pheno) {
+ return `<input type="checkbox" name="selected-phenotypes" `
+ + `id="chk-selected-phenotypes-${pheno.InbredSetCode}_${pheno.xref_id}" `
+ + `value="${pheno.InbredSetCode}_${pheno.xref_id}" `
+ + `class="chk-row-select" />`
+ }
+ },
+ {data: "sequence_number"},
+ {
+ data: function(pheno, type, set, meta) {
+ var spcs_id = {{species.SpeciesId}};
+ var pop_id = {{population.Id}};
+ var dtst_id = {{dataset.Id}};
+ return `<a href="/species/${spcs_id}` +
+ `/populations/${pop_id}` +
+ `/phenotypes/datasets/${dtst_id}` +
+ `/phenotype/${pheno.xref_id}` +
+ `" target="_blank">` +
+ `${pheno.InbredSetCode}_${pheno.xref_id}` +
+ `</a>`;
+ }
+ },
+ {
+ data: function(pheno) {
+ return (pheno.Post_publication_description ||
+ pheno.Original_description ||
+ pheno.Pre_publication_description);
+ }
+ }
+ ],
+ {
+ select: "multi+shift",
+ layout: {
+ top1Start: {
+ pageLength: {
+ text: "Show _MENU_ of _TOTAL_"
+ }
+ },
+ topStart: "info",
+ top1End: null
+ },
+ rowId: function(pheno) {
+ return `${pheno.InbredSetCode}_${pheno.xref_id}`;
+ }
+ });
+ });
+</script>
+{%endblock%}