diff options
-rw-r--r-- | r_qtl/r_qtl2.py | 18 |
1 files changed, 18 insertions, 0 deletions
diff --git a/r_qtl/r_qtl2.py b/r_qtl/r_qtl2.py index ad9271c..5b926d1 100644 --- a/r_qtl/r_qtl2.py +++ b/r_qtl/r_qtl2.py @@ -554,3 +554,21 @@ def load_samples(zipfilepath: Union[str, Path], pass return tuple(samples) + + + +def read_text_file(filepath: Union[str, Path]) -> Iterator[str]: + """Read the raw text from a text file.""" + with open(filepath, "r", encoding="utf8") as _file: + for line in _file: + yield line + + +def read_csv_file(filepath: Union[str, Path], + separator: str = ",", + comment_char: str = "#") -> Iterator[str]: + """Read a file as a csv file.""" + for line in read_text_file(filepath): + if line.startswith(comment_char): + continue + yield tuple(field.strip() for field in line.split(separator)) |