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authorFrederick Muriuki Muriithi2025-06-09 14:38:29 -0500
committerFrederick Muriuki Muriithi2025-06-09 14:38:29 -0500
commit0cbf07162e4669f43301f3b35b6f062a00d2ad29 (patch)
treecab8c901fdd6799f282bbc2e6128d03c7c1caabc /scripts
parent17c53d7544e87b5bc295d43bded376179304ca32 (diff)
downloadgn-uploader-0cbf07162e4669f43301f3b35b6f062a00d2ad29.tar.gz
Compute the data_link_ids from the request results.
Diffstat (limited to 'scripts')
-rw-r--r--scripts/load_phenotypes_to_db.py5
1 files changed, 3 insertions, 2 deletions
diff --git a/scripts/load_phenotypes_to_db.py b/scripts/load_phenotypes_to_db.py
index a76bee1..223a435 100644
--- a/scripts/load_phenotypes_to_db.py
+++ b/scripts/load_phenotypes_to_db.py
@@ -312,10 +312,11 @@ def update_auth(authserver, token, species, population, dataset, xrefdata):
return mrequests.post(
authserveruri("/auth/resource/data/link"),
headers=headers,
- data={
+ json={
"dataset_type": "phenotype",
"resource_id": resource["resource_id"],
- "data_link_ids": [item["data_link_id"] for item in linkeddata]
+ "data_link_ids": [
+ item["data_link_id"] for item in linkeddata["traits"]]
}).then(lambda attc: (user, linkeddata, resource, attc))
raise NotImplementedError("Please implement this!")