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| author | Frederick Muriuki Muriithi | 2025-12-19 12:53:20 -0600 |
|---|---|---|
| committer | Frederick Muriuki Muriithi | 2025-12-19 12:53:20 -0600 |
| commit | 56ed0f57b816b1023a97b7205268deed0a45c77e (patch) | |
| tree | 29bad7b0b2ff78230d80b5c5ec76eb2822b8d84b /scripts/rqtl2/phenotypes_qc.py | |
| parent | d04b7cb89b3fbaa1689f8f6525a2740eda7c3be3 (diff) | |
| download | gn-uploader-56ed0f57b816b1023a97b7205268deed0a45c77e.tar.gz | |
Fix issues caught by type-checker.
Diffstat (limited to 'scripts/rqtl2/phenotypes_qc.py')
| -rw-r--r-- | scripts/rqtl2/phenotypes_qc.py | 3 |
1 files changed, 2 insertions, 1 deletions
diff --git a/scripts/rqtl2/phenotypes_qc.py b/scripts/rqtl2/phenotypes_qc.py index 9f11f57..72d6c83 100644 --- a/scripts/rqtl2/phenotypes_qc.py +++ b/scripts/rqtl2/phenotypes_qc.py @@ -376,7 +376,8 @@ def run_qc(# pylint: disable=[too-many-locals] rconn: Redis, dbconn: mdb.Connection, fullyqualifiedjobid: str, - args: Namespace + args: Namespace, + logger: Logger = logger # pylint: disable=[redefined-outer-name] ) -> int: """Run quality control checks on the bundle.""" print("Beginning the quality assurance checks.") |