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author | Frederick Muriuki Muriithi | 2024-10-14 13:21:49 -0500 |
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committer | Frederick Muriuki Muriithi | 2024-10-14 13:27:43 -0500 |
commit | 6810643b159d295eeb298ce6980775d894c660f5 (patch) | |
tree | 4f3f145d80a3946ee76df2b1b2e719753527ed25 | |
parent | 57fa9c35d25a7ca5e8d7e3fc021f12cecef06a60 (diff) | |
download | gn-uploader-6810643b159d295eeb298ce6980775d894c660f5.tar.gz |
Make addition of arguments independent of each other.
-rw-r--r-- | scripts/rqtl2/cli_parser.py | 20 |
1 files changed, 15 insertions, 5 deletions
diff --git a/scripts/rqtl2/cli_parser.py b/scripts/rqtl2/cli_parser.py index bcc7a4f..9bb60a3 100644 --- a/scripts/rqtl2/cli_parser.py +++ b/scripts/rqtl2/cli_parser.py @@ -2,12 +2,22 @@ from pathlib import Path from argparse import ArgumentParser -def add_common_arguments(parser: ArgumentParser) -> ArgumentParser: - """Add common arguments to the CLI parser.""" - parser.add_argument("datasetid", - type=int, - help="The dataset to which the data belongs.") +def add_bundle_argument(parser: ArgumentParser) -> ArgumentParser: + """Add the `rqtl2bundle` argument.""" parser.add_argument("rqtl2bundle", type=Path, help="Path to R/qtl2 bundle zip file.") return parser + + +def add_datasetid_argument(parser: ArgumentParser) -> ArgumentParser: + """Add the `datasetid` argument.""" + parser.add_argument("datasetid", + type=int, + help="The dataset to which the data belongs.") + return parser + + +def add_common_arguments(parser: ArgumentParser) -> ArgumentParser: + """Add common arguments to the CLI parser.""" + return add_bundle_argument(add_datasetid_argument(parser)) |