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| author | Frederick Muriuki Muriithi | 2025-05-05 13:45:45 -0500 |
|---|---|---|
| committer | Frederick Muriuki Muriithi | 2025-05-05 16:20:10 -0500 |
| commit | 5e5ac256740e7e0e44e09111b9015c2960fb4fa3 (patch) | |
| tree | 0f73742d027825efedfbf52d3d740b31521d4238 | |
| parent | db018a349d812df6432cc73320e18f3db5e1dccd (diff) | |
| download | gn-uploader-5e5ac256740e7e0e44e09111b9015c2960fb4fa3.tar.gz | |
Provide endpoint for loading data after QC is successful.
| -rw-r--r-- | uploader/phenotypes/views.py | 19 | ||||
| -rw-r--r-- | uploader/templates/phenotypes/review-job-data.html | 12 |
2 files changed, 30 insertions, 1 deletions
diff --git a/uploader/phenotypes/views.py b/uploader/phenotypes/views.py index 20b95e2..00ecadb 100644 --- a/uploader/phenotypes/views.py +++ b/uploader/phenotypes/views.py @@ -606,6 +606,25 @@ def review_job_data( activelink="add-phenotypes") +@phenotypesbp.route( + "<int:species_id>/populations/<int:population_id>/phenotypes/datasets" + "/<int:dataset_id>/load-data-to-database", + methods=["POST"]) +@require_login +@with_dataset( + species_redirect_uri="species.populations.phenotypes.index", + population_redirect_uri="species.populations.phenotypes.select_population", + redirect_uri="species.populations.phenotypes.list_datasets") +def load_data_to_database( + species: dict, + population: dict, + dataset: dict, + **kwargs +):# pylint: disable=[unused-argument] + """Load the data from the given QC job into the database.""" + raise NotImplemented("This feature is yet to be implemented!") + + def update_phenotype_metadata(conn, metadata: dict): """Update a phenotype's basic metadata values.""" with conn.cursor(cursorclass=DictCursor) as cursor: diff --git a/uploader/templates/phenotypes/review-job-data.html b/uploader/templates/phenotypes/review-job-data.html index befb5e2..1343c19 100644 --- a/uploader/templates/phenotypes/review-job-data.html +++ b/uploader/templates/phenotypes/review-job-data.html @@ -68,7 +68,17 @@ {%endfor%} </ul> - <a href="#" class="not-implemented btn btn-primary">continue</a> + <form id="frm-review-phenotype-data" + method="POST" + action="{{url_for('species.populations.phenotypes.load_data_to_database', + species_id=species.SpeciesId, + population_id=population.Id, + dataset_id=dataset.Id)}}"> + <input type="hidden" name="data-qc-job-id" value="{{job.jobid}}" /> + <input type="submit" + value="continue" + class="btn btn-primary" /> + </form> </div> {%else%} <div class="row"> |