| Branch | Commit message | Author | Age | |
|---|---|---|---|---|
| keyring | Add fredmanglis' key to the keyring | Frederick Muriuki Muriithi | 15 months | |
| load-raw-data-no-parsing | Fix bug: fetch from cursor, not return from cursor.execute(…) | Frederick Muriuki Muriithi | 13 months | |
| main | Pass PubMed IDs from the file to difference computation function. | Frederick Muriuki Muriithi | 6 days | |
| rework-species-selection | Add missing scripts. | Frederick Muriuki Muriithi | 6 weeks | |
| rewrite-rqtl2-qc | Save errors for each file in lists. Parallelise error checking. | Frederick Muriuki Muriithi | 7 months | |
| test-resumablejs | Display error better. | Frederick Muriuki Muriithi | 9 months | |
| update-templates-for-bootstrap | Fix tests and issues caught by tests. | Frederick Muriuki Muriithi | 10 months | |
| Age | Commit message | Author | ||
| 2024-02-28 | Fix bug: fetch from cursor, not return from cursor.execute(…)load-raw-data-no-parsing | Frederick Muriuki Muriithi | ||
| 2024-02-27 | Remove use of instance path in configurations. | Frederick Muriuki Muriithi | ||
| 2024-02-21 | Check that samples/cases are consistent•••Ensure that **ALL** samples/cases/individuals mentioned in any of the pheno files actually exist in at least one of the geno files. | Frederick Muriuki Muriithi | ||
| 2024-02-21 | Pass 'filename' value to error checker function. | Frederick Muriuki Muriithi | ||
| 2024-02-20 | Track filename in the errors•••R/qtl2 bundles can contain more than one file, of the same type. When errors are encountered in any of the files, we need to be able to inform the user which file it is, in addition to the line and column number. | Frederick Muriuki Muriithi | ||
| 2024-02-20 | Generalise fetching of samples/cases/individuals. | Frederick Muriuki Muriithi | ||
| 2024-02-20 | Read samples from geno file. | Frederick Muriuki Muriithi | ||
| 2024-02-20 | Read each file separately•••Provide the function 'read_file_data' in the 'r_qtl.r_qtl2' module to read each file in the bundle separately. The function 'file_data' in the 'r_qtl.r_qtl2' module reads *ALL* the files of a particular type (e.g. geno files) and returns a single generator object with the data from *ALL* the files. This does not render itself very useful for error checking. We needed a way to check for errors, and report them for each and every file in the bundle, for easier tracking and fixing. | Frederick Muriuki Muriithi | ||
| 2024-02-20 | Stand-alone function to read control file•••Add a function that, given the path to the zip file, will read the control data. It creates its own context manager. | Frederick Muriuki Muriithi | ||
| 2024-02-16 | Replace genotype codes with values in control file. | Frederick Muriuki Muriithi | ||
| [...] | ||||
 |
index : gn-uploader | |
| gn-uploader: Data uploader for GeneNetwork |
| aboutsummaryrefslogtreecommitdiff |