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Data transformers for GeneNetwork (particularly to RDF)
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2023-11-22
Delete some RDF prefixes when transforming ProbeSet metadata.
Munyoki Kilyungi
2023-11-22
Add 'lower-case-and-replace-spaces' function
Munyoki Kilyungi
2023-11-22
Remove unused properties during ProbeSet RDF transform.
Munyoki Kilyungi
2023-11-22
Add Species join when during RDF ProbeSet transform.
Munyoki Kilyungi
2023-11-21
Add extra gnt:location term when transforming ProbeSet metadata.
Munyoki Kilyungi
2023-11-21
Add strand position when transforming ProbeSet metadata.
Munyoki Kilyungi
2023-11-21
Delete un-necessary predicates from ProbeSet transform.
Munyoki Kilyungi
2023-11-20
Add "gnt:belongsToSpecies" and "gnt:belongsToGroup" gn terms.
Munyoki Kilyungi
2023-11-17
Remove "FamilyOrder" join when transforming Species table.
Munyoki Kilyungi
2023-11-17
Capitalize InbredSetName id's consistently.
Munyoki Kilyungi
2023-11-17
Make species identifiers consistent.
Munyoki Kilyungi
2023-11-17
Revert "Make Phenotypy InbredSet classification consistent."
Munyoki Kilyungi
2023-11-17
Make Phenotypy InbredSet classification consistent.
Munyoki Kilyungi
2023-10-20
Use the correct URL for "gnt:" prefix.
Munyoki Kilyungi
2023-10-20
Alias Publication.Id to PublicationId
Munyoki Kilyungi
2023-10-19
Use InbredSetCode instead of Name when creating a trait name.
Munyoki Kilyungi
2023-10-19
Check (Publish/Geno)Freeze for InbredSet if NULL in InfoFiles.
Munyoki Kilyungi
2023-10-19
Remove un-necessary WHERE clause when dumping phenotypes.
Munyoki Kilyungi
2023-10-19
Add missing xkos prefix in phenotype dump.
Munyoki Kilyungi
2023-10-17
Index text when loading data.
Munyoki Kilyungi
2023-10-17
Replace skos:prefLabel with rdfs:label for genotypes.
Munyoki Kilyungi
2023-10-16
Group genotype labels together.
Munyoki Kilyungi
2023-10-16
Add a prefLabel for gnc:Probeset.
Munyoki Kilyungi
2023-10-16
Fix typo.
Munyoki Kilyungi
2023-10-03
Classify pheno/genotype and probeset datasets using dcat:Dataset.
Munyoki Kilyungi
2023-09-28
quit after bulk-loading triples.
Munyoki Kilyungi
2023-09-11
Add genbank dump.
Munyoki Kilyungi
2023-09-11
Update generif metadata dump.
Munyoki Kilyungi
2023-09-11
Filter out empty symbols when dumping generif metadata.
Munyoki Kilyungi
2023-08-30
Delete this probeset-data tranform
Munyoki Kilyungi
2023-08-30
Add extra mappings for broken utf-8 characters to be replaced
Munyoki Kilyungi
2023-08-30
Add an extra alias to InbredSet.InbredSetName
Munyoki Kilyungi
2023-08-30
Remodel how GeneRIF metadata is transformed
Munyoki Kilyungi
2023-08-28
Set string->identifier to defaut to "" sep and string-capitalize
Munyoki Kilyungi
2023-08-28
Update how generif metadata is dumped
Munyoki Kilyungi
2023-08-28
Update how strains are dumped
Munyoki Kilyungi
2023-08-28
Update how genotypes are transformed
Munyoki Kilyungi
2023-08-28
Add qb: and sdmx-measure: prefixes
Munyoki Kilyungi
2023-08-28
Update phenotype dump
Munyoki Kilyungi
2023-08-28
Replace gnc:probeset with gnc:Probeset
Munyoki Kilyungi
2023-08-28
Update how datasets are dumped
Munyoki Kilyungi
2023-08-28
Fix typo
Munyoki Kilyungi
2023-08-28
Replace gnt:belongsToSpecies/Set with xkos:classifiedUnder
Munyoki Kilyungi
2023-08-28
Replace gnc:Type with gnc:DatasetType
Munyoki Kilyungi
2023-08-28
Use the correct name for the Species
Munyoki Kilyungi
2023-08-28
Replace gnt:belongsToSpecies with xkos:classifiedUnder
Munyoki Kilyungi
2023-08-28
Re-introduce gnt:shortName
Munyoki Kilyungi
2023-08-28
Treat strings wrapped in "()" as symbols
Munyoki Kilyungi
2023-08-28
Rename file
Munyoki Kilyungi
2023-08-28
Add new file with classification hierarchy ontology
Munyoki Kilyungi
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