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| author | Munyoki Kilyungi | 2023-11-21 15:39:42 +0300 |
|---|---|---|
| committer | Munyoki Kilyungi | 2023-11-21 15:39:42 +0300 |
| commit | af4ef6c524776413e2b1b1ec7f4806a114b11630 (patch) | |
| tree | aaf86004dc98a3ac13c8ce6aabb4c5418b29504f | |
| parent | e099f0c16ad2f22007f5c183550254af9e4f9077 (diff) | |
| download | gn-transform-databases-af4ef6c524776413e2b1b1ec7f4806a114b11630.tar.gz | |
Delete un-necessary predicates from ProbeSet transform.
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
| -rwxr-xr-x | examples/probeset.scm | 19 |
1 files changed, 0 insertions, 19 deletions
diff --git a/examples/probeset.scm b/examples/probeset.scm index 273c635..6fb34fe 100755 --- a/examples/probeset.scm +++ b/examples/probeset.scm @@ -24,20 +24,14 @@ (gnt:targetsRegion rdfs:domain gnc:Probeset) (gnt:chr rdfs:domain gnc:Probeset) (gnt:mb rdfs:domain gnc:Probeset) - (gnt:mbMm8 rdfs:domain gnc:Probeset) - (gnt:mb2016 rdfs:domain gnc:Probeset) (gnt:hasSpecificity a owl:ObjectProperty) (gnt:hasSpecificity rdfs:domain gnc:Probeset) (gnt:hasBlatScore a owl:ObjectProperty) (gnt:hasBlatScore rdfs:domain gnc:Probeset) (gnt:hasBlatMbStart a owl:ObjectProperty) (gnt:hasBlatMbStart rdfs:domain gnc:Probeset) - (gnt:hasBlatMbStart2016 a owl:ObjectProperty) - (gnt:hasBlatMbStart2016 rdfs:domain gnc:Probeset) (gnt:hasBlatMbEnd a owl:ObjectProperty) (gnt:hasBlatMbEnd rdfs:domain gnc:Probeset) - (gnt:hasBlatMbEnd2016 a owl:ObjectProperty) - (gnt:hasBlatMbEnd2016 rdfs:domain gnc:Probeset) (gnt:hasBlatSeq a owl:ObjectProperty) (gnt:hasBlatSeq rdfs:domain gnc:Probeset) (gnt:hasTargetSeq a owl:ObjectProperty) @@ -85,11 +79,6 @@ Probe_set_target_region)))) (set gnt:chr (field ProbeSet Chr)) (set gnt:mb (annotate-field (field ("IFNULL(ProbeSet.Mb, '')" Mb)) '^^xsd:double)) - (set gnt:mbMm8 (annotate-field (field ("IFNULL(ProbeSet.Mb_mm8, '')" Mb_mm8)) - '^^xsd:double)) - (set gnt:mb2016 - (annotate-field (field ("IFNULL(ProbeSet.Mb_2016, '')" Mb_2016)) - '^^xsd:double)) (set gnt:hasSpecificity (field ("IFNULL(ProbeSet.Probe_set_specificity, '')" Probe_set_specificity))) @@ -100,18 +89,10 @@ (annotate-field (field ("IFNULL(ProbeSet.Probe_set_Blat_Mb_start, '')" Probe_set_Blat_Mb_start)) '^^xsd:double)) - (set gnt:hasBlatMbStart2016 - (annotate-field (field ("IFNULL(ProbeSet.Probe_set_Blat_Mb_start_2016, '')" - Probe_set_Blat_Mb_start_2016)) - '^^xsd:double)) (set gnt:hasBlatMbEnd (annotate-field (field ("IFNULL(ProbeSet.Probe_set_Blat_Mb_end, '')" Probe_set_Blat_Mb_end)) '^^xsd:double)) - (set gnt:hasBlatMbEnd2016 - (annotate-field (field ("IFNULL(ProbeSet.Probe_set_Blat_Mb_start_2016, '')" - Probe_set_Blat_Mb_start_2016)) - '^^xsd:double)) (set gnt:hasBlatSeq (sanitize-rdf-string (field ProbeSet BlatSeq))) (set gnt:hasTargetSeq (sanitize-rdf-string (field ProbeSet TargetSeq))) (set gnt:hasHomologeneId (ontology 'homologene: |