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Guix configuration for genenetwork machines
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4 days
Add REQUESTS_CA_BUNDLE to genenetwork2 shepherd service.
Munyoki Kilyungi
4 days
Map "/tmp" in gn2/3 and make it writable.
Munyoki Kilyungi
4 days
Explicitly set "RSCRIPT" in gn3 g-exp.
Munyoki Kilyungi
4 days
Correctly delete virtuoso build directory.
Munyoki Kilyungi
4 days
Add gn-guile service to genenetwork-shepherd-services.
Munyoki Kilyungi
4 days
Set gn2 env variables inside the shepherd service.
Munyoki Kilyungi
4 days
Remove duplicate environment settings.
Munyoki Kilyungi
7 days
Set ownership for `llm-db-path`.
Frederick Muriuki Muriithi
2024-12-06
CI/CD: Update database URI - add socket path.
Frederick Muriuki Muriithi
2024-11-26
Use forge-nginx-service-type to activate SSL certificates
Frederick Muriuki Muriithi
2024-11-26
Specify the socket for MariaDB connections.
Frederick Muriuki Muriithi
2024-11-12
Add AUTH_SERVER_URL setting to GN3
Frederick Muriuki Muriithi
2024-11-12
Expose the container logs.
Frederick Muriuki Muriithi
2024-11-12
Bind a host directory to container's /tmp
Frederick Muriuki Muriithi
2024-11-12
Unbind mysql director(y/ies)
Frederick Muriuki Muriithi
2024-11-12
Use virtuoso's state directory as its data directory
Frederick Muriuki Muriithi
2024-11-12
Explicitly set Virtuoso's Database and Transaction files.
Frederick Muriuki Muriithi
2024-11-12
Pass log-level to gn-auth application
Frederick Muriuki Muriithi
2024-11-12
Define REQUESTS_CA_BUNDLE envvar for python-requests
Frederick Muriuki Muriithi
2024-11-12
Add cron job for running transform-genenetwork-database-gexp.
Munyoki Kilyungi
2024-11-12
Delete %transform-genenetwork-database-export-directory.
Munyoki Kilyungi
2024-11-12
Rename transform-genenetwork-database.
Munyoki Kilyungi
2024-11-12
Make %virtuoso-data-dir writeable by laminar.
Munyoki Kilyungi
2024-11-12
Refactor ttl and data-loading into Virtuoso in ci job.
Munyoki Kilyungi
2024-11-05
Bind host directory to the container's /tmp directory
Frederick Muriuki Muriithi
2024-10-30
Explicitly name virtuoso's database files.
Frederick Muriuki Muriithi
2024-10-29
Do not share auth-db with genenetwork3 gunicorn app.
Frederick Muriuki Muriithi
2024-10-29
Specify path to LLM database in production.
Frederick Muriuki Muriithi
2024-10-29
Add llm-db-path field to genenetwork configuration..
Frederick Muriuki Muriithi
2024-10-29
Remove obsolete SSL key configuration.
Frederick Muriuki Muriithi
2024-10-29
Enable AI search in genenetwork service.
Frederick Muriuki Muriithi
2024-10-29
Add additional virtuso configuration.
Frederick Muriuki Muriithi
2024-10-24
Move production to tux04.
Frederick Muriuki Muriithi
2024-10-24
Add GN3 alias server to genenetwork service.
Frederick Muriuki Muriithi
2024-10-24
Add sanitizer for log-level configuration field.
Arun Isaac
2024-10-24
Make <gn-uploader-configuration> log-level a symbol.
Arun Isaac
2024-10-24
Re-format and improve indentation.
Arun Isaac
2024-10-24
Regularize <gn-uploader-configuration> getter functions.
Arun Isaac
2024-10-24
Add log-level field to genenetwork-configuration.
Frederick Muriuki Muriithi
2024-10-24
Set REAPER_COMMAND in gn3.conf.
Frederick Muriuki Muriithi
2024-10-24
Set GENOTYPE_FILES in gn3.conf.
Frederick Muriuki Muriithi
2024-10-18
Move directory permissions setting G-exp into separate variable.
Arun Isaac
2024-10-18
Provide UTF-8 locale so characters are encoded correctly.
Munyoki Kilyungi
2024-10-18
Explicitly set AUTH_SERVER_URL in gn3.conf.
Munyoki Kilyungi
2024-10-18
Upgrade slurm to 24.05.3.
Arun Isaac
2024-10-02
Update server root for gn-uploader.
Frederick Muriuki Muriithi
2024-10-02
Update path to genotype files.
Frederick Muriuki Muriithi
2024-09-12
Enable AI Search in GN2 CD.
Munyoki Kilyungi
2024-09-03
Configure slurm with --with-yaml.
Arun Isaac
2024-08-29
Install slurmrestd too.
Arun Isaac
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