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authorFrederick Muriuki Muriithi2024-10-24 13:55:15 +0100
committerArun Isaac2024-10-24 17:36:17 +0100
commit0db031185aad42bcf2e0bf40dc55b21eea04f77b (patch)
tree8e1ef1e0d1304d34a07942fbed8fb0db45933d63
parent29446d02381917e6ebd46cf8d5ebd11382aaf429 (diff)
downloadgn-machines-0db031185aad42bcf2e0bf40dc55b21eea04f77b.tar.gz
Set REAPER_COMMAND in gn3.conf.
* genenetwork/services/genenetwork.scm (genenetwork-gunicorn-apps):
Set REAPER_COMMAND in gn3.conf.

Signed-off-by: Arun Isaac <arunisaac@systemreboot.net>
-rw-r--r--genenetwork/services/genenetwork.scm3
1 files changed, 2 insertions, 1 deletions
diff --git a/genenetwork/services/genenetwork.scm b/genenetwork/services/genenetwork.scm
index f69872f..e04de66 100644
--- a/genenetwork/services/genenetwork.scm
+++ b/genenetwork/services/genenetwork.scm
@@ -310,7 +310,8 @@ object."
                                        ("SPARQL_ENDPOINT" ,sparql-endpoint)
                                        ("SQL_URI" ,sql-uri)
                                        ("XAPIAN_DB_PATH" ,xapian-db)
-                                       ("GENOTYPE_FILES" ,genotype-files)))))
+                                       ("GENOTYPE_FILES" ,genotype-files)
+                                       ("REAPER_COMMAND" ,(file-append gn2-profile "/bin/qtlreaper"))))))
            (gn-auth-conf (computed-file "gn-auth.conf"
                                         (configuration-file-gexp
                                          `(("GN_AUTH_SECRETS" ,(string-append gn-auth-secrets "/gn-auth-secrets.py"))