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authorMunyoki Kilyungi2024-05-20 13:20:09 +0300
committerMunyoki Kilyungi2024-08-09 13:32:12 +0300
commita02b57db696333b86c832ade7ecf812ebfa22705 (patch)
tree004d991913072269f221d5f8e55623444bcd8ed2
parente34e7da50fc0ff5ed41e8bdaf2b1d41c9e9cf534 (diff)
downloadgn-docs-a02b57db696333b86c832ade7ecf812ebfa22705.tar.gz
Update RDF documentation.
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
-rw-r--r--rdf-documentation/dataset-metadata.md12
-rw-r--r--rdf-documentation/phenotype-metadata.md2
2 files changed, 13 insertions, 1 deletions
diff --git a/rdf-documentation/dataset-metadata.md b/rdf-documentation/dataset-metadata.md
index e918653..416b8f5 100644
--- a/rdf-documentation/dataset-metadata.md
+++ b/rdf-documentation/dataset-metadata.md
@@ -26,6 +26,18 @@ gn:Infofiles_infopagename_ -> dct:accessRights -> datasetstatus(datasetstatusnam
gn:Infofiles_infopagename_ -> gnt:belongsToGroup -> gn:setInbredsetname
gn:Infofiles_infopagename_ -> gnt:hasTissue -> gn:tissueTissue_short_name
gn:Infofiles_infopagename_ -> gnt:usesNormalization -> gn:avgMethodAvgmethod_avgmethodname
+gn:Infofiles_infopagename_ -> gnt:hasSummary -> <https://git.genenetwork.org/gn-docs/tree/general/datasets/Infofiles_infopagename_/summary.rtf>
+gn:Infofiles_infopagename_ -> gnt:hasTissueInfo -> <https://git.genenetwork.org/gn-docs/tree/general/datasets/Infofiles_infopagename_/tissue.rtf>
+gn:Infofiles_infopagename_ -> gnt:hasCitation -> <https://git.genenetwork.org/gn-docs/tree/general/datasets/Infofiles_infopagename_/citation.rtf>
+gn:Infofiles_infopagename_ -> gnt:hasSpecifics -> <https://git.genenetwork.org/gn-docs/tree/general/datasets/Infofiles_infopagename_/specifics.rtf>
+gn:Infofiles_infopagename_ -> gnt:hasCaseInfo -> <https://git.genenetwork.org/gn-docs/tree/general/datasets/Infofiles_infopagename_/cases.rtf>
+gn:Infofiles_infopagename_ -> gnt:hasPlatformInfo -> <https://git.genenetwork.org/gn-docs/tree/general/datasets/Infofiles_infopagename_/platform.rtf>
+gn:Infofiles_infopagename_ -> gnt:hasDataProcessingInfo -> <https://git.genenetwork.org/gn-docs/tree/general/datasets/Infofiles_infopagename_/processing.rtf>
+gn:Infofiles_infopagename_ -> gnt:hasNotes -> <https://git.genenetwork.org/gn-docs/tree/general/datasets/Infofiles_infopagename_/notes.rtf>
+gn:Infofiles_infopagename_ -> gnt:hasExperimentType -> <https://git.genenetwork.org/gn-docs/tree/general/datasets/Infofiles_infopagename_/experiment-type.rtf>
+gn:Infofiles_infopagename_ -> gnt:hasExperimentDesign -> <https://git.genenetwork.org/gn-docs/tree/general/datasets/Infofiles_infopagename_/experiment-design.rtf>
+gn:Infofiles_infopagename_ -> gnt:hasContributors -> <https://git.genenetwork.org/gn-docs/tree/general/datasets/Infofiles_infopagename_/contributors.rtf>
+gn:Infofiles_infopagename_ -> gnt:hasAcknowledgement -> <https://git.genenetwork.org/gn-docs/tree/general/datasets/Infofiles_infopagename_/acknowledgment.rtf>
gn:Infofiles_infopagename_ -> gnt:usesPlatform -> gn:platformGenechip_genechip
gn:Infofiles_infopagename_ -> gnt:hasGeoSeriesId ->
```
diff --git a/rdf-documentation/phenotype-metadata.md b/rdf-documentation/phenotype-metadata.md
index d811d40..a6e6c02 100644
--- a/rdf-documentation/phenotype-metadata.md
+++ b/rdf-documentation/phenotype-metadata.md
@@ -20,13 +20,13 @@ gn:traitPhenotype -> dct:description -> PhenotypePost_publication_description
gn:traitPhenotype -> gnt:abbreviation -> Phenotype(Post_publication_abbreviation)
gn:traitPhenotype -> gnt:labCode -> Phenotype(Lab_code)
gn:traitPhenotype -> gnt:submitter -> PhenotypeSubmitter
+gn:traitPhenotype -> dct:contributor -> PhenotypeOwner
gn:traitPhenotype -> gnt:mean -> "mean"^^xsd:double
gn:traitPhenotype -> gnt:locus -> gn:Publishxreflocus
gn:traitPhenotype -> gnt:lodScore -> "lrs"^^xsd:double
gn:traitPhenotype -> gnt:additive -> "additive"^^xsd:double
gn:traitPhenotype -> gnt:sequence -> "PublishXRef(Sequence)"^^xsd:integer
gn:traitPhenotype -> dct:isReferencedBy -> pubmed:pmid
-gn:traitPhenotype -> dct:contributor -> PhenotypeOwner
```
Here's an example query: