From a02b57db696333b86c832ade7ecf812ebfa22705 Mon Sep 17 00:00:00 2001 From: Munyoki Kilyungi Date: Mon, 20 May 2024 13:20:09 +0300 Subject: Update RDF documentation. Signed-off-by: Munyoki Kilyungi --- rdf-documentation/dataset-metadata.md | 12 ++++++++++++ rdf-documentation/phenotype-metadata.md | 2 +- 2 files changed, 13 insertions(+), 1 deletion(-) diff --git a/rdf-documentation/dataset-metadata.md b/rdf-documentation/dataset-metadata.md index e918653..416b8f5 100644 --- a/rdf-documentation/dataset-metadata.md +++ b/rdf-documentation/dataset-metadata.md @@ -26,6 +26,18 @@ gn:Infofiles_infopagename_ -> dct:accessRights -> datasetstatus(datasetstatusnam gn:Infofiles_infopagename_ -> gnt:belongsToGroup -> gn:setInbredsetname gn:Infofiles_infopagename_ -> gnt:hasTissue -> gn:tissueTissue_short_name gn:Infofiles_infopagename_ -> gnt:usesNormalization -> gn:avgMethodAvgmethod_avgmethodname +gn:Infofiles_infopagename_ -> gnt:hasSummary -> +gn:Infofiles_infopagename_ -> gnt:hasTissueInfo -> +gn:Infofiles_infopagename_ -> gnt:hasCitation -> +gn:Infofiles_infopagename_ -> gnt:hasSpecifics -> +gn:Infofiles_infopagename_ -> gnt:hasCaseInfo -> +gn:Infofiles_infopagename_ -> gnt:hasPlatformInfo -> +gn:Infofiles_infopagename_ -> gnt:hasDataProcessingInfo -> +gn:Infofiles_infopagename_ -> gnt:hasNotes -> +gn:Infofiles_infopagename_ -> gnt:hasExperimentType -> +gn:Infofiles_infopagename_ -> gnt:hasExperimentDesign -> +gn:Infofiles_infopagename_ -> gnt:hasContributors -> +gn:Infofiles_infopagename_ -> gnt:hasAcknowledgement -> gn:Infofiles_infopagename_ -> gnt:usesPlatform -> gn:platformGenechip_genechip gn:Infofiles_infopagename_ -> gnt:hasGeoSeriesId -> ``` diff --git a/rdf-documentation/phenotype-metadata.md b/rdf-documentation/phenotype-metadata.md index d811d40..a6e6c02 100644 --- a/rdf-documentation/phenotype-metadata.md +++ b/rdf-documentation/phenotype-metadata.md @@ -20,13 +20,13 @@ gn:traitPhenotype -> dct:description -> PhenotypePost_publication_description gn:traitPhenotype -> gnt:abbreviation -> Phenotype(Post_publication_abbreviation) gn:traitPhenotype -> gnt:labCode -> Phenotype(Lab_code) gn:traitPhenotype -> gnt:submitter -> PhenotypeSubmitter +gn:traitPhenotype -> dct:contributor -> PhenotypeOwner gn:traitPhenotype -> gnt:mean -> "mean"^^xsd:double gn:traitPhenotype -> gnt:locus -> gn:Publishxreflocus gn:traitPhenotype -> gnt:lodScore -> "lrs"^^xsd:double gn:traitPhenotype -> gnt:additive -> "additive"^^xsd:double gn:traitPhenotype -> gnt:sequence -> "PublishXRef(Sequence)"^^xsd:integer gn:traitPhenotype -> dct:isReferencedBy -> pubmed:pmid -gn:traitPhenotype -> dct:contributor -> PhenotypeOwner ``` Here's an example query: -- cgit v1.2.3