genenetwork3 - GeneNetwork3 REST API for data science and machine learning

Age	Commit message (Expand)	Author
2025-02-06	refactor: Add file_path to output only if it is created.	Alexander_Kabui
2025-02-06	refactor: Check if data before attempting write operation.	Alexander_Kabui
2025-02-06	refactor: return code for Calledprocesserror response.	Alexander_Kabui
2025-02-06	feat: Add module docstring for rqtl2 computations.	Alexander_Kabui
2025-02-06	refactor: remove unused imports.	Alexander_Kabui
2025-02-06	feat: Add function to write input data to a json file.	Alexander_Kabui
2025-02-06	feat: Add function to prepare files and workspace directory for computation.	Alexander_Kabui
2025-02-06	feat: Add utility function to create a file if it does not exist.	Alexander_Kabui
2025-02-06	feat: Add function to compose an rqtl2 run command.	Alexander_Kabui
2025-02-06	feat: Add function to validate list of keys in object.	Alexander_Kabui
2025-02-06	feat: Add function to generate rqtl2 data files.	Alexander_Kabui
2025-02-06	feat: Add method to write list of data to csv file.	Alexander_Kabui
2025-02-06	feat: Add computational module for rqtl2.	Alexander_Kabui
2025-01-13	mypy fixes.	Alexander_Kabui
2025-01-13	refactor: Returns markers and pseudomarkers as names in pairscan results.	Alexander_Kabui
2025-01-09	Typo fixes.	Alexander_Kabui
2025-01-09	refactor: raise and Handle error a app level.	Alexander_Kabui
2025-01-09	feat: Add a decorator function to enable streaming functinality.	Alexander_Kabui
2025-01-09	feat: Add function to run an external process and capture result in a file.	Alexander_Kabui
2025-01-09	feat: Init add streaming module for genenetwork3.	Alexander_Kabui
2024-12-17	feat: Init integrate streaming functionality to rqtl1.	Alexander_Kabui
2024-12-13	fix: Fix unused variables pylint.	Alexander_Kabui
2024-12-13	Fix pylint error line too long.	Alexander_Kabui
2024-12-13	fix: Fetch the correct value from rqtl output file for permutation.	Alexander_Kabui
2024-12-12	Remove quote marks for qtl output.	Munyoki Kilyungi
2024-09-27	Bug: Use absolute paths in place of relative paths.	Frederick Muriuki Muriithi
2024-09-12	Fix pylint errors.	Munyoki Kilyungi
2024-09-12	Fix failing tests after merging in Pjotr's pull request.	Frederick Muriuki Muriithi
2024-09-12	From gn3 only use TMPDIR/gn3 paths	Pjotr Prins
2024-09-12	Replace TMPDIR/output with TMPDIR/gn3 so it is clear where it comes from	Pjotr Prins
2024-09-12	Modify script paths so they can be edited in Guix	Pjotr Prins
2024-09-12	Make sure TMPDIR directories exist!	Pjotr Prins
2024-09-12	Move assert_paths_exist into fs_helpers	Pjotr Prins
2024-09-12	Change behavior of do_paths_exist to actually throw useful error	Pjotr Prins
2024-09-12	Getting Rqtl to run on fallback	Pjotr Prins
2024-09-12	Move assert_paths_exist into fs_helpers	Pjotr Prins
2024-09-12	Change behavior of do_paths_exist to actually throw useful error	Pjotr Prins
2024-02-25	Disable too-many-arguments for "run_reaper".	Munyoki Kilyungi
2024-02-19	Pass qtlreaper command path as argument to run_reaper	zsloan
2023-10-27	Remove reimport "Optional".	Munyoki Kilyungi
2023-10-27	Make implicit optional type hints PEP 484 compliant.	Munyoki Kilyungi
2023-10-26	Fix errors caught by mypy.	Frederick Muriuki Muriithi
2023-10-06	pylint: fix variable name.	Frederick Muriuki Muriithi
2023-10-06	Get `CORRELATION_COMMAND` from current_app not `gn3.settings`	Frederick Muriuki Muriithi
2023-09-05	Fix C3001: Lambda expression assigned to a variable	Munyoki Kilyungi
2023-01-25	Some comments	Pjotr Prins
2022-12-21	gn3: (gn3.random -> gn3.chancy): Rename module to avoid conflicts.	Frederick Muriuki Muriithi
2022-12-06	mypy and pylint fixes	Alexander_Kabui
2022-12-02	correlations: return `None` rather than zero for missing lit corrs	Frederick Muriuki Muriithi
2022-11-29	remove trailing whitespace	AlexanderKabui