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2025-03-04fix: Replace file path fetching code in rqtl2.py with current_app.root_pathMunyoki Kilyungi (aider)
2025-02-28Fix issues caught by mypy.Frederick Muriuki Muriithi
2025-02-28Fix linting errors.Frederick Muriuki Muriithi
2025-02-21Fix versioning of WIKI entries.Munyoki Kilyungi
2025-02-19fix: Read and parse correct permutation file from R/qtl1Alexander_Kabui
2025-02-10feat: Add LMDB sample data retrieval API endpoint with testsMunyoki Kilyungi (aider)
2025-02-07feat: Enable streaming functionality for rqtl2.Alexander_Kabui
2025-02-06refactor: code refactoring.Alexander_Kabui
2025-02-06refactor: Rename pheno_map to physical_map .Alexander_Kabui
2025-02-06feat: Add functionality to process output to compute endpoint.Alexander_Kabui
2025-02-06Minor fix.Alexander_Kabui
2025-02-06refactor: Minor cleanup.Alexander_Kabui
2025-02-06refactor: Refactor compute endpoint for rqtl2.Alexander_Kabui
2025-01-21Enable new inserts of new wiki entries.Munyoki Kilyungi
2025-01-09Minor typo fix.Alexander_Kabui
2025-01-09Minor fix.Alexander_Kabui
2025-01-09feat: Add a decorator function to enable streaming functinality.Alexander_Kabui
2025-01-09fix: pylint fix.Alexander_Kabui
2025-01-09refactor: remove obsolete streaming endpoint.Alexander_Kabui
2025-01-09refactor: enhance docstring for streaming endpoint.Alexander_Kabui
2025-01-09feat: Add and register streaming blueprint.Alexander_Kabui
2025-01-09feat: Add streaming main endpoint.Alexander_Kabui
2025-01-09feat: Init add module for streaming api endpoins.Alexander_Kabui
2025-01-09refactor: import streaming functionality from module.Alexander_Kabui
2025-01-08refactor: Modify error message for run_process function.Alexander_Kabui
2025-01-08refactor: Return results as dict with correct metadata for subprocess.Alexander_Kabui
2025-01-08refactor: Pass arg commands to subprocess as a list.Alexander_Kabui
2025-01-07feat: Revert commit 688d6a4.Alexander_Kabui
2025-01-07feat: remove shell True to for debug.Alexander_Kabui
2024-12-20Add todo note for writing rqtl file.Alexander_Kabui
2024-12-20fix: Pylint fixes.Alexander_Kabui
2024-12-20feat: Enable streaming for output.Alexander_Kabui
2024-12-17feat: Init integrate streaming functionality to rqtl1.Alexander_Kabui
2024-12-07Check whether genofile/phenofile exist separately.Munyoki Kilyungi
2024-12-04Temp disable with for test Popen processes.Alexander_Kabui
2024-12-04refactor: make pylint fixes.Alexander_Kabui
2024-11-28feat: define general endpoint for streaming stdout using unique identifier.Alexander_Kabui
2024-11-27feat: return run id for compute and streaming api's.Alexander_Kabui
2024-11-26feat: Implement reading from file functionalityAlexander_Kabui
2024-11-22feat: return pointer position from where the file was last read.Alexander_Kabui
2024-11-22feat: Add new endpoint to read stdout given a file identifier.Alexander_Kabui
2024-11-22feat: implement ednpoint for computing qtl using rqtl2.Alexander_Kabui
2024-10-18refactor: replace gn3.auth.db with gn3.sqlite_db_utils and drop all refs to g...John Nduli
2024-10-18refactor: move definition of auth errs and remove auth cli utilsJohn Nduli
2024-10-15Lint: Fix linting errors.Frederick Muriuki Muriithi
2024-10-15Pass in correct file path.Frederick Muriuki Muriithi
2024-10-15fix: use require_token to validate gn3 apisJohn Nduli
2024-10-14Add end-point for fetching NCBI metadata.Munyoki Kilyungi
2024-09-30chore: pylint code fixJohn Nduli
2024-09-30feat: rollback mysql transaction when rdf insert failsJohn Nduli