index
:
genenetwork3
auth/implement-authorization-code-flow
bugfix/remove-pre-data-parsing
chores/ctl-wgcna-enhancement
chores/fixes
ci-cd-scripts
correlation-return-fewer-results
data-access-levels-endpoint
feature/autocomplete-generation
feature/lmdb-rust
feature/reimplement-corrmp
fixture-for-pcorrs
gn-guile
luna
main
migrate-to-python3.10
oauth2_auth_flow
refactor-circular-import
rework-genotype-linking
technical-specification
GeneNetwork3 REST API for data science and machine learning
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Author
2024-09-18
Get the next versionId from SQL.
Munyoki Kilyungi
2024-09-18
Update docs with extra conf vars for updating virtuoso.
Munyoki Kilyungi
2024-09-18
Update "POST /wiki/comment_id/edit" to have RDF edits.
Munyoki Kilyungi
2024-09-18
Fix typo.
Munyoki Kilyungi
2024-09-18
Add method that inserts new RIF comments.
Munyoki Kilyungi
2024-09-18
Fetch symbol by it's name.
Munyoki Kilyungi
2024-09-18
Fetch the next comment version in RDF.
Munyoki Kilyungi
2024-09-18
Rename sparql_construct_query -> sparql_query.
Munyoki Kilyungi
2024-09-18
Add new method for updating RDF Graph content.
Munyoki Kilyungi
2024-09-18
Run python-black against file.
Munyoki Kilyungi
2024-09-17
Fix C0411/C0412 pylint errors in gn3.api.metadata.api.wiki.
Munyoki Kilyungi
2024-09-17
fix: error when result dict contains None
John Nduli
2024-09-17
feat: require auth for edit api call
John Nduli
2024-09-12
Fix pylint errors.
Munyoki Kilyungi
2024-09-12
feat: pick results from sqlite3 if they were stored
John Nduli
2024-09-12
Initialise the package to ensure setuptools finds it.
Frederick Muriuki Muriithi
2024-09-12
BugFix: assign value and use variable.
Frederick Muriuki Muriithi
2024-09-12
Fix failing tests after merging in Pjotr's pull request.
Frederick Muriuki Muriithi
2024-09-12
Gracefully print out debug messages even outside app context
Frederick Muriuki Muriithi
2024-09-12
Bump version
Pjotr Prins
2024-09-12
From gn3 only use TMPDIR/gn3 paths
Pjotr Prins
2024-09-12
Make sure dir exists before running R/qtl
Pjotr Prins
2024-09-12
Replace TMPDIR/output with TMPDIR/gn3 so it is clear where it comes from
Pjotr Prins
2024-09-12
Modify script paths so they can be edited in Guix
Pjotr Prins
2024-09-12
rqtl_wrapper: minor fixes
Pjotr Prins
2024-09-12
Mistake using envvar
Pjotr Prins
2024-09-12
Make sure TMPDIR directories exist!
Pjotr Prins
2024-09-12
Fix Rqtl test
Pjotr Prins
2024-09-12
Getting Rqtl to run on fallback
Pjotr Prins
2024-09-12
assert_paths_exist: make throw_error optional
Pjotr Prins
2024-09-12
gn3/errors.py: add stack trace to error log
Pjotr Prins
2024-09-12
Move assert_paths_exist into fs_helpers
Pjotr Prins
2024-09-12
Change behavior of do_paths_exist to actually throw useful error
Pjotr Prins
2024-09-12
Getting Rqtl to run on fallback
Pjotr Prins
2024-09-12
README
Pjotr Prins
2024-09-12
assert_paths_exist: make throw_error optional
Pjotr Prins
2024-09-12
Move assert_paths_exist into fs_helpers
Pjotr Prins
2024-09-12
Change behavior of do_paths_exist to actually throw useful error
Pjotr Prins
2024-09-12
Make the gnqa search endpoint a get request.
Alexander_Kabui
2024-09-11
Minor typo fix.
Alexander_Kabui
2024-09-11
Update docs on use for custom request when query fahamu Api.
Alexander_Kabui
2024-09-11
Update SPARQL queries to fetch from graph with a default value.
Munyoki Kilyungi
2024-09-11
Handle case when result is empty when sanitizing json-ld result.
Munyoki Kilyungi
2024-09-11
Replace format-string with f-strings.
Munyoki Kilyungi
2024-09-11
Fix mypy errors.
Munyoki Kilyungi
2024-09-11
Run python-black against file.
Munyoki Kilyungi
2024-09-11
Add test cases for wiki.__sanitize_result.
Munyoki Kilyungi
2024-09-11
Move comment on the manual sort to the doc-string.
Munyoki Kilyungi
2024-09-11
Abstract out sanitizing json-ld result into a function.
Munyoki Kilyungi
2024-09-11
Update RDF queries to match ADR/000/gn-transform-databases.
Munyoki Kilyungi
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