| Age | Commit message (Expand) | Author |
|---|---|---|
| 2024-09-19 | Remove extraneous keyword....* gn3/api/metadata_api/wiki.py (edit_wiki): Remove comment_id from args---it's already in the insert_dict. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | Munyoki Kilyungi |
| 2024-09-18 | Pass in insert_dict instead of payload in "get_wiki_entries"....* gn3/api/metadata_api/wiki.py (edit_wiki) [insert_dict]: Add species, categories fields. [update_wiki_comment]: Pass in insert_dict, and get rid of redundant keys. Directly pass in sparql_auth's conf params instead of a dict. * gn3/db/rdf/wiki.py (get_next_comment_version): Get rid of redundant params. Use fields directly from insert_dict. Directly pass in sparql_auth's conf params instead of a dict. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | Munyoki Kilyungi |
| 2024-09-18 | Pass in the createtime as an arg when inserting into RDF graph....* gn3/api/metadata_api/wiki.py (edit_wiki): Pass in the createtime as an arg. * gn3/db/rdf/wiki.py: Remove un-used imports. (update_wiki_comment): Use passed in "created" arg in the createtime field. This makes sure that the SQL/RDF timestamps match. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | Munyoki Kilyungi |
| 2024-09-18 | Get the next versionId from SQL....* gn3/api/metadata_api/wiki.py (edit_wiki): Get the next version Id from SQL * gn3/db/rdf/wiki.py (get_next_comment_version): Delete. (update_wiki_comment): Provide the next_version id as an extra arg. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | Munyoki Kilyungi |
| 2024-09-18 | Update "POST /wiki/comment_id/edit" to have RDF edits....* gn3/api/metadata_api/wiki.py: Import update_wiki_comment. (edit_wiki): Update wiki in RDF. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | Munyoki Kilyungi |
| 2024-09-18 | Fix typo....Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | Munyoki Kilyungi |
| 2024-09-17 | Fix C0411/C0412 pylint errors in gn3.api.metadata.api.wiki....* gn3/api/metadata_api/wiki.py: Re-order imports to fix pylint errors. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | Munyoki Kilyungi |
| 2024-09-17 | feat: require auth for edit api call | John Nduli |
| 2024-09-12 | Fix pylint errors....Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | Munyoki Kilyungi |
| 2024-09-12 | feat: pick results from sqlite3 if they were stored | John Nduli |
| 2024-09-12 | Initialise the package to ensure setuptools finds it. | Frederick Muriuki Muriithi |
| 2024-09-12 | Make sure dir exists before running R/qtl | Pjotr Prins |
| 2024-09-12 | Replace TMPDIR/output with TMPDIR/gn3 so it is clear where it comes from | Pjotr Prins |
| 2024-09-12 | rqtl_wrapper: minor fixes | Pjotr Prins |
| 2024-09-12 | Make sure TMPDIR directories exist! | Pjotr Prins |
| 2024-09-12 | Move assert_paths_exist into fs_helpers | Pjotr Prins |
| 2024-09-12 | Change behavior of do_paths_exist to actually throw useful error | Pjotr Prins |
| 2024-09-12 | Getting Rqtl to run on fallback | Pjotr Prins |
| 2024-09-12 | Move assert_paths_exist into fs_helpers | Pjotr Prins |
| 2024-09-12 | Change behavior of do_paths_exist to actually throw useful error | Pjotr Prins |
| 2024-09-12 | Make the gnqa search endpoint a get request. | Alexander_Kabui |
| 2024-09-11 | Replace format-string with f-strings....* gn3/api/llm.py (delete_records): Using format-strings causes pylint to error out. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | Munyoki Kilyungi |
| 2024-09-11 | Run python-black against file....Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | Munyoki Kilyungi |
| 2024-09-06 | Modify endpoint to use query string. | Alexander_Kabui |
| 2024-09-06 | Merge pull request #188 from genenetwork/chores/merge-gnqa-api...Chores/merge gnqa api | Alexander Kabui |
| 2024-09-05 | Fix type error....* gn3/api/metadata_api/wiki.py: Remove FIXME comment. * gn3/db/wiki.py: Fix type error. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | Munyoki Kilyungi |
| 2024-09-05 | Use the correct header to request json-ld data....In HTTP, we use content negotiation to server different representations of a resource to the same URI to help the user agent specify which representation is best suited for the user: <https://developer.mozilla.org/en-US/docs/Web/HTTP/Content_negotiation> The "Accept" requet HTTP indicates which content types the user is supposed to understand: <https://developer.mozilla.org/en-US/docs/Web/HTTP/Headers/Accept> * gn3/api/metadata_api/wiki.py (get_wiki_entries): Use the "Accept" header. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | Munyoki Kilyungi |
| 2024-09-05 | Add comment history....* gn3/api/metadata_api/wiki.py: Import get_comment_history. (get_history): New end-point. * gn3/db/rdf/wiki.py: (get_comment_history): New function. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | Munyoki Kilyungi |
| 2024-09-05 | Ignore type error and add a FIXME stub....Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | Munyoki Kilyungi |
| 2024-09-05 | Restructure RDF module....* gn3/api/metadata.py: Import constants from gn3.db.rdf * gn3/api/metadata_api/wiki.py: Ditto. Import "get_wiki_entries_by_symbol" from gn3.db.rdf.wiki. * gn3/db/constants.py: Delete file and move all constants ... * gn3/db/rdf.py: ... and functions ... * gn3/db/rdf/__init__.py: ... here. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | Munyoki Kilyungi |
| 2024-09-05 | Sort previos records by datetime. | Alexander_Kabui |
| 2024-09-05 | Apply pep8 formatting. | Alexander_Kabui |
| 2024-09-05 | Create new endpoints for fetching user previous records. | Alexander_Kabui |
| 2024-09-03 | Remove unused imports. | Alexander_Kabui |
| 2024-09-03 | Use Jsonb for storing results. | Alexander_Kabui |
| 2024-09-02 | Fix spacing after punctuation. | Alexander_Kabui |
| 2024-09-02 | Use default datetime for table. | Alexander_Kabui |
| 2024-09-02 | Add spacing after punctuation. | Alexander_Kabui |
| 2024-08-30 | Fix merge conflict. | Alexander_Kabui |
| 2024-08-29 | docs: add function comments | John Nduli |
| 2024-08-29 | feat: add api calls to get categories and last comment | John Nduli |
| 2024-08-29 | Add default timestamp and and primary key for Rating table. | Alexander_Kabui |
| 2024-08-29 | Fix minor typo....Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | Munyoki Kilyungi |
| 2024-08-29 | Check for empty values when fetching search history. | Alexander_Kabui |
| 2024-08-29 | Use correct http method `Delete` for search history. | Alexander_Kabui |
| 2024-08-29 | Update gnqa search endpoint from POST to PUT. | Alexander_Kabui |
| 2024-08-26 | Fix mypy errors....Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | Munyoki Kilyungi |
| 2024-08-26 | Move "GET /wiki/<symbol>" end-point to gn3.api.metadata.wiki....* gn3/api/metadata.py (get_wiki_entries): Move this... * gn3/api/metadata_api/wiki.py (edit_wiki): ... here. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | Munyoki Kilyungi |
| 2024-08-26 | Auto-pep8 buffer and ignore type check for payload....* gn3/api/metadata_api/wiki.py (edit_wiki): Ignore type-check for payload. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | Munyoki Kilyungi |
| 2024-08-26 | Fix pylint errors....* gn3/api/metadata.py: Remove duplicate imports. * gn3/db/constants.py: Add docstring. * gn3/db/rdf.py (get_wiki_entries_by_symbol): Remove duplicate dictionary key. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | Munyoki Kilyungi |
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index : genenetwork3 | |
| GeneNetwork3 REST API for data science and machine learning |
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